Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CLHC1Q8NHS4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.66■□□□□ 0.74
CLHC1Q8NHS4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLHC1Q8NHS4 AC010141.2-201ENST00000452426 721 ntBASIC19.66■□□□□ 0.74
CLHC1Q8NHS4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CLHC1Q8NHS4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.66■□□□□ 0.74
CLHC1Q8NHS4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.66■□□□□ 0.74
CLHC1Q8NHS4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLHC1Q8NHS4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.66■□□□□ 0.74
CLHC1Q8NHS4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.66■□□□□ 0.74
CLHC1Q8NHS4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLHC1Q8NHS4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLHC1Q8NHS4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.66■□□□□ 0.74
CLHC1Q8NHS4 AL512408.1-201ENST00000569378 2000 ntBASIC19.66■□□□□ 0.74
CLHC1Q8NHS4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLHC1Q8NHS4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLHC1Q8NHS4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.66■□□□□ 0.74
CLHC1Q8NHS4 AL121603.2-201ENST00000557373 2117 ntBASIC19.66■□□□□ 0.74
CLHC1Q8NHS4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLHC1Q8NHS4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLHC1Q8NHS4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLHC1Q8NHS4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLHC1Q8NHS4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLHC1Q8NHS4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLHC1Q8NHS4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.65■□□□□ 0.74
CLHC1Q8NHS4 SLC7A5P2-201ENST00000553010 536 ntBASIC19.65■□□□□ 0.74
CLHC1Q8NHS4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.65■□□□□ 0.74
CLHC1Q8NHS4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.65■□□□□ 0.74
CLHC1Q8NHS4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLHC1Q8NHS4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLHC1Q8NHS4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
CLHC1Q8NHS4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
CLHC1Q8NHS4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLHC1Q8NHS4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.64■□□□□ 0.74
CLHC1Q8NHS4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLHC1Q8NHS4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.64■□□□□ 0.74
CLHC1Q8NHS4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLHC1Q8NHS4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLHC1Q8NHS4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CLHC1Q8NHS4 AC245052.3-201ENST00000450182 901 ntBASIC19.64■□□□□ 0.73
CLHC1Q8NHS4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLHC1Q8NHS4 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.64■□□□□ 0.73
CLHC1Q8NHS4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CLHC1Q8NHS4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CLHC1Q8NHS4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLHC1Q8NHS4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLHC1Q8NHS4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLHC1Q8NHS4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CLHC1Q8NHS4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CLHC1Q8NHS4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLHC1Q8NHS4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.64■□□□□ 0.73
CLHC1Q8NHS4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLHC1Q8NHS4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLHC1Q8NHS4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLHC1Q8NHS4 AFG3L1P-217ENST00000557444 2447 ntBASIC19.63■□□□□ 0.73
CLHC1Q8NHS4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLHC1Q8NHS4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLHC1Q8NHS4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.63■□□□□ 0.73
CLHC1Q8NHS4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLHC1Q8NHS4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.63■□□□□ 0.73
CLHC1Q8NHS4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLHC1Q8NHS4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLHC1Q8NHS4 KRT16P2-201ENST00000414673 1423 ntBASIC19.63■□□□□ 0.73
CLHC1Q8NHS4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLHC1Q8NHS4 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.63■□□□□ 0.73
CLHC1Q8NHS4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.63■□□□□ 0.73
CLHC1Q8NHS4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CLHC1Q8NHS4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.63■□□□□ 0.73
CLHC1Q8NHS4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.63■□□□□ 0.73
CLHC1Q8NHS4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.63■□□□□ 0.73
CLHC1Q8NHS4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.63■□□□□ 0.73
CLHC1Q8NHS4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CLHC1Q8NHS4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CLHC1Q8NHS4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLHC1Q8NHS4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.63■□□□□ 0.73
CLHC1Q8NHS4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLHC1Q8NHS4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLHC1Q8NHS4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLHC1Q8NHS4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLHC1Q8NHS4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLHC1Q8NHS4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLHC1Q8NHS4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.62■□□□□ 0.73
CLHC1Q8NHS4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLHC1Q8NHS4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.62■□□□□ 0.73
CLHC1Q8NHS4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLHC1Q8NHS4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.62■□□□□ 0.73
CLHC1Q8NHS4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLHC1Q8NHS4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.62■□□□□ 0.73
CLHC1Q8NHS4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLHC1Q8NHS4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
CLHC1Q8NHS4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.62■□□□□ 0.73
CLHC1Q8NHS4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLHC1Q8NHS4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.62■□□□□ 0.73
CLHC1Q8NHS4 DUX4L2-201ENST00000561772 1275 ntBASIC19.62■□□□□ 0.73
CLHC1Q8NHS4 AP001160.3-201ENST00000601484 763 ntBASIC19.62■□□□□ 0.73
CLHC1Q8NHS4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
CLHC1Q8NHS4 AC120498.10-201ENST00000621827 505 ntBASIC19.62■□□□□ 0.73
CLHC1Q8NHS4 DUX4L6-201ENST00000626483 1275 ntBASIC19.62■□□□□ 0.73
CLHC1Q8NHS4 DUX4L1-201ENST00000627662 1275 ntBASIC19.62■□□□□ 0.73
CLHC1Q8NHS4 DUX4L8-201ENST00000629013 1275 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms