Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC71Q8IV32 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC71Q8IV32 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC71Q8IV32 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC71Q8IV32 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC71Q8IV32 AL355802.2-201ENST00000402069 882 ntBASIC19.2■□□□□ 0.66
CCDC71Q8IV32 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC71Q8IV32 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC71Q8IV32 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC71Q8IV32 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC71Q8IV32 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC71Q8IV32 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC71Q8IV32 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC71Q8IV32 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC71Q8IV32 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC71Q8IV32 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC71Q8IV32 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC71Q8IV32 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC71Q8IV32 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC71Q8IV32 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC71Q8IV32 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC71Q8IV32 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC71Q8IV32 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC71Q8IV32 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC71Q8IV32 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC71Q8IV32 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCDC71Q8IV32 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC71Q8IV32 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC71Q8IV32 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC71Q8IV32 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC71Q8IV32 MIR663A-201ENST00000385250 93 ntBASIC19.19■□□□□ 0.66
CCDC71Q8IV32 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC71Q8IV32 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC71Q8IV32 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.19■□□□□ 0.66
CCDC71Q8IV32 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.19■□□□□ 0.66
CCDC71Q8IV32 AC104187.1-201ENST00000607510 612 ntBASIC19.19■□□□□ 0.66
CCDC71Q8IV32 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.19■□□□□ 0.66
CCDC71Q8IV32 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC71Q8IV32 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC71Q8IV32 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC71Q8IV32 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC71Q8IV32 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC71Q8IV32 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CCDC71Q8IV32 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC71Q8IV32 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC71Q8IV32 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CCDC71Q8IV32 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC71Q8IV32 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC71Q8IV32 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC71Q8IV32 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CCDC71Q8IV32 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC71Q8IV32 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC71Q8IV32 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC71Q8IV32 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CCDC71Q8IV32 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC71Q8IV32 AC005224.4-201ENST00000583262 1652 ntBASIC19.18■□□□□ 0.66
CCDC71Q8IV32 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC71Q8IV32 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC71Q8IV32 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC71Q8IV32 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC71Q8IV32 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC71Q8IV32 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC71Q8IV32 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC71Q8IV32 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
CCDC71Q8IV32 AC027702.1-201ENST00000563810 1770 ntBASIC19.18■□□□□ 0.66
CCDC71Q8IV32 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC71Q8IV32 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC71Q8IV32 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC71Q8IV32 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC71Q8IV32 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC71Q8IV32 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC71Q8IV32 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC71Q8IV32 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC71Q8IV32 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC71Q8IV32 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC71Q8IV32 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CCDC71Q8IV32 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC71Q8IV32 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC71Q8IV32 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC71Q8IV32 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC71Q8IV32 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC71Q8IV32 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC71Q8IV32 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC71Q8IV32 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC71Q8IV32 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC71Q8IV32 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC71Q8IV32 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC71Q8IV32 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC71Q8IV32 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC71Q8IV32 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC71Q8IV32 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC71Q8IV32 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC71Q8IV32 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC71Q8IV32 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC71Q8IV32 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC71Q8IV32 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC71Q8IV32 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC71Q8IV32 NCF1B-203ENST00000435988 1254 ntBASIC19.16■□□□□ 0.66
CCDC71Q8IV32 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC71Q8IV32 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms