Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD3Q7Z407 AC007322.3-201ENST00000426526 701 ntBASIC14.4□□□□□ -0.1
CSMD3Q7Z407 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CSMD3Q7Z407 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CSMD3Q7Z407 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD3Q7Z407 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD3Q7Z407 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD3Q7Z407 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD3Q7Z407 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC14.4□□□□□ -0.1
CSMD3Q7Z407 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CSMD3Q7Z407 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.4□□□□□ -0.1
CSMD3Q7Z407 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
CSMD3Q7Z407 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CSMD3Q7Z407 KRT18P68-201ENST00000392293 1000 ntBASIC14.4□□□□□ -0.1
CSMD3Q7Z407 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
CSMD3Q7Z407 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC14.4□□□□□ -0.1
CSMD3Q7Z407 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD3Q7Z407 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD3Q7Z407 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC14.39□□□□□ -0.11
CSMD3Q7Z407 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSMD3Q7Z407 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.39□□□□□ -0.11
CSMD3Q7Z407 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSMD3Q7Z407 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.39□□□□□ -0.11
CSMD3Q7Z407 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSMD3Q7Z407 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSMD3Q7Z407 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSMD3Q7Z407 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSMD3Q7Z407 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.39□□□□□ -0.11
CSMD3Q7Z407 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSMD3Q7Z407 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSMD3Q7Z407 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSMD3Q7Z407 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSMD3Q7Z407 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CSMD3Q7Z407 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CSMD3Q7Z407 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSMD3Q7Z407 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD3Q7Z407 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD3Q7Z407 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD3Q7Z407 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CSMD3Q7Z407 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD3Q7Z407 SERP1-205ENST00000487153 657 ntTSL 4 BASIC14.38□□□□□ -0.11
CSMD3Q7Z407 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD3Q7Z407 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.38□□□□□ -0.11
CSMD3Q7Z407 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC14.38□□□□□ -0.11
CSMD3Q7Z407 ME2-206ENST00000638410 2289 ntTSL 5 BASIC14.38□□□□□ -0.11
CSMD3Q7Z407 ME2-210ENST00000639255 2262 ntTSL 5 BASIC14.38□□□□□ -0.11
CSMD3Q7Z407 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD3Q7Z407 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CSMD3Q7Z407 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD3Q7Z407 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.38□□□□□ -0.11
CSMD3Q7Z407 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD3Q7Z407 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.38□□□□□ -0.11
CSMD3Q7Z407 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD3Q7Z407 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD3Q7Z407 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD3Q7Z407 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CSMD3Q7Z407 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSMD3Q7Z407 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.38□□□□□ -0.11
CSMD3Q7Z407 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC14.38□□□□□ -0.11
CSMD3Q7Z407 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.38□□□□□ -0.11
CSMD3Q7Z407 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD3Q7Z407 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD3Q7Z407 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC14.37□□□□□ -0.11
CSMD3Q7Z407 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD3Q7Z407 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD3Q7Z407 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD3Q7Z407 NUDT16P1-203ENST00000513809 620 ntBASIC14.37□□□□□ -0.11
CSMD3Q7Z407 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.37□□□□□ -0.11
CSMD3Q7Z407 AF186192.3-201ENST00000583427 947 ntBASIC14.37□□□□□ -0.11
CSMD3Q7Z407 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC14.37□□□□□ -0.11
CSMD3Q7Z407 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD3Q7Z407 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD3Q7Z407 AC116050.2-201ENST00000612102 1779 ntBASIC14.37□□□□□ -0.11
CSMD3Q7Z407 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CSMD3Q7Z407 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.37□□□□□ -0.11
CSMD3Q7Z407 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD3Q7Z407 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
CSMD3Q7Z407 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD3Q7Z407 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD3Q7Z407 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.37□□□□□ -0.11
CSMD3Q7Z407 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CSMD3Q7Z407 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.37□□□□□ -0.11
CSMD3Q7Z407 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC14.37□□□□□ -0.11
CSMD3Q7Z407 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD3Q7Z407 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD3Q7Z407 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD3Q7Z407 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CSMD3Q7Z407 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
CSMD3Q7Z407 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD3Q7Z407 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD3Q7Z407 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD3Q7Z407 AC005521.1-201ENST00000393351 872 ntBASIC14.36□□□□□ -0.11
CSMD3Q7Z407 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.36□□□□□ -0.11
CSMD3Q7Z407 Six3os1_6.1-201ENST00000620790 196 ntBASIC14.36□□□□□ -0.11
CSMD3Q7Z407 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD3Q7Z407 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD3Q7Z407 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CSMD3Q7Z407 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD3Q7Z407 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CSMD3Q7Z407 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms