Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 AC068338.2-201ENST00000563278 1430 ntBASIC19.17■□□□□ 0.66
RTL4Q6ZR62 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.17■□□□□ 0.66
RTL4Q6ZR62 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTL4Q6ZR62 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RTL4Q6ZR62 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTL4Q6ZR62 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTL4Q6ZR62 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTL4Q6ZR62 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTL4Q6ZR62 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.17■□□□□ 0.66
RTL4Q6ZR62 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTL4Q6ZR62 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
RTL4Q6ZR62 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTL4Q6ZR62 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTL4Q6ZR62 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTL4Q6ZR62 AC073130.3-201ENST00000624389 2278 ntBASIC19.17■□□□□ 0.66
RTL4Q6ZR62 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTL4Q6ZR62 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTL4Q6ZR62 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTL4Q6ZR62 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTL4Q6ZR62 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTL4Q6ZR62 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
RTL4Q6ZR62 CYP2T1P-201ENST00000432607 1285 ntBASIC19.16■□□□□ 0.66
RTL4Q6ZR62 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.16■□□□□ 0.66
RTL4Q6ZR62 AC083906.2-201ENST00000511578 360 ntBASIC19.16■□□□□ 0.66
RTL4Q6ZR62 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.16■□□□□ 0.66
RTL4Q6ZR62 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.16■□□□□ 0.66
RTL4Q6ZR62 AC133552.2-202ENST00000575694 574 ntBASIC19.16■□□□□ 0.66
RTL4Q6ZR62 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RTL4Q6ZR62 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTL4Q6ZR62 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RTL4Q6ZR62 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTL4Q6ZR62 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
RTL4Q6ZR62 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RTL4Q6ZR62 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.16■□□□□ 0.66
RTL4Q6ZR62 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RTL4Q6ZR62 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTL4Q6ZR62 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
RTL4Q6ZR62 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RTL4Q6ZR62 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTL4Q6ZR62 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.15■□□□□ 0.66
RTL4Q6ZR62 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTL4Q6ZR62 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTL4Q6ZR62 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.15■□□□□ 0.66
RTL4Q6ZR62 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTL4Q6ZR62 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTL4Q6ZR62 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RTL4Q6ZR62 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RTL4Q6ZR62 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.15■□□□□ 0.66
RTL4Q6ZR62 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTL4Q6ZR62 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.15■□□□□ 0.66
RTL4Q6ZR62 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.15■□□□□ 0.66
RTL4Q6ZR62 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RTL4Q6ZR62 AF201337.1-201ENST00000520239 748 ntBASIC19.15■□□□□ 0.66
RTL4Q6ZR62 AC069236.1-201ENST00000604339 616 ntBASIC19.15■□□□□ 0.66
RTL4Q6ZR62 AL591742.1-201ENST00000604433 565 ntBASIC19.15■□□□□ 0.66
RTL4Q6ZR62 AC008694.1-202ENST00000636953 945 ntBASIC19.15■□□□□ 0.66
RTL4Q6ZR62 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RTL4Q6ZR62 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RTL4Q6ZR62 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTL4Q6ZR62 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTL4Q6ZR62 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RTL4Q6ZR62 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTL4Q6ZR62 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTL4Q6ZR62 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTL4Q6ZR62 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RTL4Q6ZR62 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
RTL4Q6ZR62 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RTL4Q6ZR62 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.14■□□□□ 0.65
RTL4Q6ZR62 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTL4Q6ZR62 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
RTL4Q6ZR62 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.14■□□□□ 0.65
RTL4Q6ZR62 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTL4Q6ZR62 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTL4Q6ZR62 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.14■□□□□ 0.65
RTL4Q6ZR62 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.14■□□□□ 0.65
RTL4Q6ZR62 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.14■□□□□ 0.65
RTL4Q6ZR62 AL162412.1-201ENST00000567129 965 ntBASIC19.14■□□□□ 0.65
RTL4Q6ZR62 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.14■□□□□ 0.65
RTL4Q6ZR62 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.14■□□□□ 0.65
RTL4Q6ZR62 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.14■□□□□ 0.65
RTL4Q6ZR62 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTL4Q6ZR62 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTL4Q6ZR62 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTL4Q6ZR62 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.14■□□□□ 0.65
RTL4Q6ZR62 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.65
RTL4Q6ZR62 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.65
RTL4Q6ZR62 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTL4Q6ZR62 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTL4Q6ZR62 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
RTL4Q6ZR62 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTL4Q6ZR62 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RTL4Q6ZR62 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTL4Q6ZR62 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.13■□□□□ 0.65
RTL4Q6ZR62 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.13■□□□□ 0.65
RTL4Q6ZR62 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTL4Q6ZR62 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RTL4Q6ZR62 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTL4Q6ZR62 OR10C1-204ENST00000622521 1039 ntBASIC19.13■□□□□ 0.65
RTL4Q6ZR62 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.13■□□□□ 0.65
RTL4Q6ZR62 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms