Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF43Q68DV7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF43Q68DV7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RNF43Q68DV7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.48■■□□□ 1.03
RNF43Q68DV7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
RNF43Q68DV7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RNF43Q68DV7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RNF43Q68DV7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RNF43Q68DV7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF43Q68DV7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.48■■□□□ 1.03
RNF43Q68DV7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNF43Q68DV7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNF43Q68DV7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNF43Q68DV7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF43Q68DV7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.47■■□□□ 1.03
RNF43Q68DV7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNF43Q68DV7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF43Q68DV7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.47■■□□□ 1.03
RNF43Q68DV7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.47■■□□□ 1.03
RNF43Q68DV7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNF43Q68DV7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF43Q68DV7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF43Q68DV7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNF43Q68DV7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.47■■□□□ 1.03
RNF43Q68DV7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF43Q68DV7 AF106564.1-201ENST00000607058 2553 ntBASIC21.46■■□□□ 1.03
RNF43Q68DV7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF43Q68DV7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF43Q68DV7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.46■■□□□ 1.03
RNF43Q68DV7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF43Q68DV7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF43Q68DV7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF43Q68DV7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.46■■□□□ 1.03
RNF43Q68DV7 KRT18P29-201ENST00000397031 1267 ntBASIC21.46■■□□□ 1.03
RNF43Q68DV7 POU5F1P3-201ENST00000428824 1078 ntBASIC21.46■■□□□ 1.03
RNF43Q68DV7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF43Q68DV7 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.46■■□□□ 1.03
RNF43Q68DV7 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.46■■□□□ 1.03
RNF43Q68DV7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.46■■□□□ 1.03
RNF43Q68DV7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF43Q68DV7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.46■■□□□ 1.03
RNF43Q68DV7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF43Q68DV7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.46■■□□□ 1.03
RNF43Q68DV7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF43Q68DV7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF43Q68DV7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF43Q68DV7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.45■■□□□ 1.02
RNF43Q68DV7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF43Q68DV7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RNF43Q68DV7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.45■■□□□ 1.02
RNF43Q68DV7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
RNF43Q68DV7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.45■■□□□ 1.02
RNF43Q68DV7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF43Q68DV7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.45■■□□□ 1.02
RNF43Q68DV7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF43Q68DV7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF43Q68DV7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.45■■□□□ 1.02
RNF43Q68DV7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
RNF43Q68DV7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.45■■□□□ 1.02
RNF43Q68DV7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
RNF43Q68DV7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF43Q68DV7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF43Q68DV7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
RNF43Q68DV7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF43Q68DV7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.44■■□□□ 1.02
RNF43Q68DV7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF43Q68DV7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
RNF43Q68DV7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF43Q68DV7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF43Q68DV7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.44■■□□□ 1.02
RNF43Q68DV7 AL512625.2-201ENST00000417533 625 ntBASIC21.44■■□□□ 1.02
RNF43Q68DV7 AF201337.1-201ENST00000520239 748 ntBASIC21.44■■□□□ 1.02
RNF43Q68DV7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.44■■□□□ 1.02
RNF43Q68DV7 ITM2C-210ENST00000620962 501 ntBASIC21.44■■□□□ 1.02
RNF43Q68DV7 OR10C1-204ENST00000622521 1039 ntBASIC21.44■■□□□ 1.02
RNF43Q68DV7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.44■■□□□ 1.02
RNF43Q68DV7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF43Q68DV7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF43Q68DV7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.44■■□□□ 1.02
RNF43Q68DV7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF43Q68DV7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF43Q68DV7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF43Q68DV7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RNF43Q68DV7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
RNF43Q68DV7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.43■■□□□ 1.02
RNF43Q68DV7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF43Q68DV7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF43Q68DV7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RNF43Q68DV7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
RNF43Q68DV7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.43■■□□□ 1.02
RNF43Q68DV7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
RNF43Q68DV7 AC091799.1-201ENST00000422823 811 ntBASIC21.43■■□□□ 1.02
RNF43Q68DV7 AC073210.2-201ENST00000430369 194 ntBASIC21.43■■□□□ 1.02
RNF43Q68DV7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.43■■□□□ 1.02
RNF43Q68DV7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RNF43Q68DV7 AL591742.1-201ENST00000604433 565 ntBASIC21.43■■□□□ 1.02
RNF43Q68DV7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF43Q68DV7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.43■■□□□ 1.02
RNF43Q68DV7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF43Q68DV7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms