Protein–RNA interactions for Protein: Q5TGY1

TMCO4, Transmembrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO4Q5TGY1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TMCO4Q5TGY1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
TMCO4Q5TGY1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TMCO4Q5TGY1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
TMCO4Q5TGY1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TMCO4Q5TGY1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TMCO4Q5TGY1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TMCO4Q5TGY1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TMCO4Q5TGY1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TMCO4Q5TGY1 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.14■□□□□ 0.97
TMCO4Q5TGY1 DUX4L16-201ENST00000555130 1264 ntBASIC21.14■□□□□ 0.97
TMCO4Q5TGY1 AL162412.1-201ENST00000567129 965 ntBASIC21.14■□□□□ 0.97
TMCO4Q5TGY1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
TMCO4Q5TGY1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
TMCO4Q5TGY1 AC013268.1-206ENST00000638368 961 ntBASIC21.14■□□□□ 0.97
TMCO4Q5TGY1 AC112229.1-201ENST00000639295 961 ntBASIC21.14■□□□□ 0.97
TMCO4Q5TGY1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TMCO4Q5TGY1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TMCO4Q5TGY1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.14■□□□□ 0.97
TMCO4Q5TGY1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TMCO4Q5TGY1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TMCO4Q5TGY1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TMCO4Q5TGY1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TMCO4Q5TGY1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
TMCO4Q5TGY1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.13■□□□□ 0.97
TMCO4Q5TGY1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.13■□□□□ 0.97
TMCO4Q5TGY1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TMCO4Q5TGY1 AC231657.2-201ENST00000624556 255 ntBASIC21.13■□□□□ 0.97
TMCO4Q5TGY1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TMCO4Q5TGY1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TMCO4Q5TGY1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TMCO4Q5TGY1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMCO4Q5TGY1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TMCO4Q5TGY1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMCO4Q5TGY1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.12■□□□□ 0.97
TMCO4Q5TGY1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMCO4Q5TGY1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMCO4Q5TGY1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.12■□□□□ 0.97
TMCO4Q5TGY1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.12■□□□□ 0.97
TMCO4Q5TGY1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TMCO4Q5TGY1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.12■□□□□ 0.97
TMCO4Q5TGY1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMCO4Q5TGY1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.12■□□□□ 0.97
TMCO4Q5TGY1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.12■□□□□ 0.97
TMCO4Q5TGY1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.12■□□□□ 0.97
TMCO4Q5TGY1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMCO4Q5TGY1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMCO4Q5TGY1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMCO4Q5TGY1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.12■□□□□ 0.97
TMCO4Q5TGY1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMCO4Q5TGY1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.11■□□□□ 0.97
TMCO4Q5TGY1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMCO4Q5TGY1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMCO4Q5TGY1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMCO4Q5TGY1 AC091799.1-201ENST00000422823 811 ntBASIC21.11■□□□□ 0.97
TMCO4Q5TGY1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.11■□□□□ 0.97
TMCO4Q5TGY1 AC080038.1-201ENST00000611274 1154 ntBASIC21.11■□□□□ 0.97
TMCO4Q5TGY1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TMCO4Q5TGY1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.1■□□□□ 0.97
TMCO4Q5TGY1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TMCO4Q5TGY1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.1■□□□□ 0.97
TMCO4Q5TGY1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TMCO4Q5TGY1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMCO4Q5TGY1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TMCO4Q5TGY1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
TMCO4Q5TGY1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMCO4Q5TGY1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.1■□□□□ 0.97
TMCO4Q5TGY1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.1■□□□□ 0.97
TMCO4Q5TGY1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.1■□□□□ 0.97
TMCO4Q5TGY1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
TMCO4Q5TGY1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMCO4Q5TGY1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.1■□□□□ 0.97
TMCO4Q5TGY1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMCO4Q5TGY1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
TMCO4Q5TGY1 CNN2P6-201ENST00000439038 900 ntBASIC21.09■□□□□ 0.97
TMCO4Q5TGY1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.09■□□□□ 0.97
TMCO4Q5TGY1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TMCO4Q5TGY1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.09■□□□□ 0.97
TMCO4Q5TGY1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TMCO4Q5TGY1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMCO4Q5TGY1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TMCO4Q5TGY1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.09■□□□□ 0.97
TMCO4Q5TGY1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.08■□□□□ 0.97
TMCO4Q5TGY1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMCO4Q5TGY1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMCO4Q5TGY1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TMCO4Q5TGY1 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.08■□□□□ 0.97
TMCO4Q5TGY1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TMCO4Q5TGY1 CDV3P1-201ENST00000471403 739 ntBASIC21.08■□□□□ 0.97
TMCO4Q5TGY1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.08■□□□□ 0.97
TMCO4Q5TGY1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.08■□□□□ 0.97
TMCO4Q5TGY1 AL591742.1-201ENST00000604433 565 ntBASIC21.08■□□□□ 0.97
TMCO4Q5TGY1 AC073111.5-205ENST00000641717 521 ntBASIC21.08■□□□□ 0.97
TMCO4Q5TGY1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
TMCO4Q5TGY1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
TMCO4Q5TGY1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.08■□□□□ 0.96
TMCO4Q5TGY1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TMCO4Q5TGY1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.08■□□□□ 0.96
TMCO4Q5TGY1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.07■□□□□ 0.96
TMCO4Q5TGY1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms