Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RUNDC3AQ59EK9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RUNDC3AQ59EK9 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RUNDC3AQ59EK9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.37■□□□□ 0.69
RUNDC3AQ59EK9 MIR939-201ENST00000401314 82 ntBASIC19.37■□□□□ 0.69
RUNDC3AQ59EK9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.37■□□□□ 0.69
RUNDC3AQ59EK9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.37■□□□□ 0.69
RUNDC3AQ59EK9 AL355001.2-201ENST00000620617 1191 ntBASIC19.37■□□□□ 0.69
RUNDC3AQ59EK9 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.37■□□□□ 0.69
RUNDC3AQ59EK9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RUNDC3AQ59EK9 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.37■□□□□ 0.69
RUNDC3AQ59EK9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RUNDC3AQ59EK9 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.37■□□□□ 0.69
RUNDC3AQ59EK9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RUNDC3AQ59EK9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RUNDC3AQ59EK9 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RUNDC3AQ59EK9 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RUNDC3AQ59EK9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RUNDC3AQ59EK9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RUNDC3AQ59EK9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RUNDC3AQ59EK9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RUNDC3AQ59EK9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RUNDC3AQ59EK9 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RUNDC3AQ59EK9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
RUNDC3AQ59EK9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RUNDC3AQ59EK9 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RUNDC3AQ59EK9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RUNDC3AQ59EK9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.36■□□□□ 0.69
RUNDC3AQ59EK9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.36■□□□□ 0.69
RUNDC3AQ59EK9 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.36■□□□□ 0.69
RUNDC3AQ59EK9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RUNDC3AQ59EK9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RUNDC3AQ59EK9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.36■□□□□ 0.69
RUNDC3AQ59EK9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RUNDC3AQ59EK9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RUNDC3AQ59EK9 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RUNDC3AQ59EK9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RUNDC3AQ59EK9 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RUNDC3AQ59EK9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RUNDC3AQ59EK9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RUNDC3AQ59EK9 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.35■□□□□ 0.69
RUNDC3AQ59EK9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.35■□□□□ 0.69
RUNDC3AQ59EK9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.35■□□□□ 0.69
RUNDC3AQ59EK9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.35■□□□□ 0.69
RUNDC3AQ59EK9 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.35■□□□□ 0.69
RUNDC3AQ59EK9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.35■□□□□ 0.69
RUNDC3AQ59EK9 AF213884.3-201ENST00000563833 479 ntBASIC19.35■□□□□ 0.69
RUNDC3AQ59EK9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.35■□□□□ 0.69
RUNDC3AQ59EK9 AC131212.1-201ENST00000613771 668 ntBASIC19.35■□□□□ 0.69
RUNDC3AQ59EK9 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.35■□□□□ 0.69
RUNDC3AQ59EK9 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.35■□□□□ 0.69
RUNDC3AQ59EK9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RUNDC3AQ59EK9 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RUNDC3AQ59EK9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.35■□□□□ 0.69
RUNDC3AQ59EK9 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.35■□□□□ 0.69
RUNDC3AQ59EK9 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RUNDC3AQ59EK9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.35■□□□□ 0.69
RUNDC3AQ59EK9 TCF3P1-201ENST00000423021 1937 ntBASIC19.35■□□□□ 0.69
RUNDC3AQ59EK9 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.34■□□□□ 0.69
RUNDC3AQ59EK9 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RUNDC3AQ59EK9 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RUNDC3AQ59EK9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RUNDC3AQ59EK9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RUNDC3AQ59EK9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RUNDC3AQ59EK9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RUNDC3AQ59EK9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RUNDC3AQ59EK9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
RUNDC3AQ59EK9 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RUNDC3AQ59EK9 AC091305.1-201ENST00000479476 895 ntBASIC19.34■□□□□ 0.69
RUNDC3AQ59EK9 AL136967.2-201ENST00000623968 743 ntBASIC19.34■□□□□ 0.69
RUNDC3AQ59EK9 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RUNDC3AQ59EK9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
RUNDC3AQ59EK9 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.34■□□□□ 0.69
RUNDC3AQ59EK9 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RUNDC3AQ59EK9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RUNDC3AQ59EK9 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RUNDC3AQ59EK9 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
RUNDC3AQ59EK9 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RUNDC3AQ59EK9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.33■□□□□ 0.69
RUNDC3AQ59EK9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RUNDC3AQ59EK9 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
RUNDC3AQ59EK9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RUNDC3AQ59EK9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.33■□□□□ 0.68
RUNDC3AQ59EK9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
RUNDC3AQ59EK9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
RUNDC3AQ59EK9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
RUNDC3AQ59EK9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RUNDC3AQ59EK9 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RUNDC3AQ59EK9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
RUNDC3AQ59EK9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RUNDC3AQ59EK9 AC008406.3-201ENST00000620001 1374 ntBASIC19.32■□□□□ 0.68
RUNDC3AQ59EK9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
RUNDC3AQ59EK9 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RUNDC3AQ59EK9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RUNDC3AQ59EK9 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RUNDC3AQ59EK9 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RUNDC3AQ59EK9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RUNDC3AQ59EK9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RUNDC3AQ59EK9 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.32■□□□□ 0.68
RUNDC3AQ59EK9 AL031432.3-201ENST00000607698 485 ntBASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms