Protein–RNA interactions for Protein: Q38SD2

LRRK1, Leucine-rich repeat serine/threonine-protein kinase 1, humanhuman

Predictions only

Length 2,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1Q38SD2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.36■□□□□ 0.85
LRRK1Q38SD2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRK1Q38SD2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRK1Q38SD2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
LRRK1Q38SD2 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRK1Q38SD2 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.35■□□□□ 0.85
LRRK1Q38SD2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.35■□□□□ 0.85
LRRK1Q38SD2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
LRRK1Q38SD2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRRK1Q38SD2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRK1Q38SD2 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRRK1Q38SD2 POU5F1P3-201ENST00000428824 1078 ntBASIC20.35■□□□□ 0.85
LRRK1Q38SD2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRRK1Q38SD2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRRK1Q38SD2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.35■□□□□ 0.85
LRRK1Q38SD2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.35■□□□□ 0.85
LRRK1Q38SD2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.34■□□□□ 0.85
LRRK1Q38SD2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.34■□□□□ 0.85
LRRK1Q38SD2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
LRRK1Q38SD2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.34■□□□□ 0.85
LRRK1Q38SD2 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.34■□□□□ 0.85
LRRK1Q38SD2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
LRRK1Q38SD2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.34■□□□□ 0.85
LRRK1Q38SD2 AP003097.1-201ENST00000530657 1135 ntBASIC20.34■□□□□ 0.85
LRRK1Q38SD2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
LRRK1Q38SD2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
LRRK1Q38SD2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRK1Q38SD2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LRRK1Q38SD2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LRRK1Q38SD2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRK1Q38SD2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LRRK1Q38SD2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.34■□□□□ 0.85
LRRK1Q38SD2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LRRK1Q38SD2 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.34■□□□□ 0.85
LRRK1Q38SD2 AC066615.1-201ENST00000640911 628 ntBASIC20.34■□□□□ 0.85
LRRK1Q38SD2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRK1Q38SD2 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRK1Q38SD2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRRK1Q38SD2 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRRK1Q38SD2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRRK1Q38SD2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
LRRK1Q38SD2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRRK1Q38SD2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LRRK1Q38SD2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRRK1Q38SD2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.33■□□□□ 0.85
LRRK1Q38SD2 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRRK1Q38SD2 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LRRK1Q38SD2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LRRK1Q38SD2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRRK1Q38SD2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.33■□□□□ 0.84
LRRK1Q38SD2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRRK1Q38SD2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRRK1Q38SD2 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
LRRK1Q38SD2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
LRRK1Q38SD2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.33■□□□□ 0.84
LRRK1Q38SD2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
LRRK1Q38SD2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.33■□□□□ 0.84
LRRK1Q38SD2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRK1Q38SD2 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRK1Q38SD2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.32■□□□□ 0.84
LRRK1Q38SD2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRK1Q38SD2 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.32■□□□□ 0.84
LRRK1Q38SD2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.32■□□□□ 0.84
LRRK1Q38SD2 AL589743.5-201ENST00000616611 1050 ntBASIC20.32■□□□□ 0.84
LRRK1Q38SD2 ITM2C-210ENST00000620962 501 ntBASIC20.32■□□□□ 0.84
LRRK1Q38SD2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRK1Q38SD2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.32■□□□□ 0.84
LRRK1Q38SD2 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
LRRK1Q38SD2 AC098590.1-201ENST00000468126 897 ntBASIC20.32■□□□□ 0.84
LRRK1Q38SD2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.32■□□□□ 0.84
LRRK1Q38SD2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRK1Q38SD2 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRRK1Q38SD2 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRK1Q38SD2 AC011484.1-201ENST00000377652 1995 ntBASIC20.32■□□□□ 0.84
LRRK1Q38SD2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRK1Q38SD2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRK1Q38SD2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRK1Q38SD2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRK1Q38SD2 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRK1Q38SD2 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
LRRK1Q38SD2 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
LRRK1Q38SD2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.31■□□□□ 0.84
LRRK1Q38SD2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.31■□□□□ 0.84
LRRK1Q38SD2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.31■□□□□ 0.84
LRRK1Q38SD2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRK1Q38SD2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LRRK1Q38SD2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRK1Q38SD2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRK1Q38SD2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRK1Q38SD2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.31■□□□□ 0.84
LRRK1Q38SD2 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.31■□□□□ 0.84
LRRK1Q38SD2 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.31■□□□□ 0.84
LRRK1Q38SD2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRK1Q38SD2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRK1Q38SD2 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRK1Q38SD2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRK1Q38SD2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRK1Q38SD2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRRK1Q38SD2 AC006128.1-201ENST00000624704 1661 ntBASIC20.3■□□□□ 0.84
LRRK1Q38SD2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms