Protein–RNA interactions for Protein: Q12428

PDH1, Probable 2-methylcitrate dehydratase, yeastyeast

Known RBP Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PDH1Q12428 CAF120YNL278W 3183 nt2.71□□□□□ -1.97
PDH1Q12428 tR(ACG)Q2tR(ACG)Q2 74 nt2.71□□□□□ -1.98
PDH1Q12428 SPC1YJR010C-A 285 nt2.71□□□□□ -1.98
PDH1Q12428 YKR033CYKR033C 426 nt2.71□□□□□ -1.98
PDH1Q12428 DDR48YMR173W 1293 nt2.71□□□□□ -1.98
PDH1Q12428 YNL179CYNL179C 438 nt2.71□□□□□ -1.98
PDH1Q12428 SLN1YIL147C 3663 nt2.71□□□□□ -1.98
PDH1Q12428 PRP8YHR165C 7242 nt2.71□□□□□ -1.98
PDH1Q12428 NPR3YHL023C 3441 nt2.7□□□□□ -1.98
PDH1Q12428 MOT1YPL082C 5604 nt2.7□□□□□ -1.98
PDH1Q12428 MES1YGR264C 2256 nt2.7□□□□□ -1.98
PDH1Q12428 GET1YGL020C 708 nt2.7□□□□□ -1.98
PDH1Q12428 ARV1YLR242C 966 nt2.7□□□□□ -1.98
PDH1Q12428 FPR1YNL135C 345 nt2.7□□□□□ -1.98
PDH1Q12428 YNL146C-AYNL146C-A 195 nt2.7□□□□□ -1.98
PDH1Q12428 RIO2YNL207W 1278 nt2.7□□□□□ -1.98
PDH1Q12428 ALG14YBR070C 714 nt2.7□□□□□ -1.98
PDH1Q12428 YPR170W-AYPR170W-A 186 nt2.7□□□□□ -1.98
PDH1Q12428 ARR2YPR200C 393 nt2.7□□□□□ -1.98
PDH1Q12428 DNL4YOR005C 2835 nt2.7□□□□□ -1.98
PDH1Q12428 RLI1YDR091C 1827 nt2.7□□□□□ -1.98
PDH1Q12428 RLF2YPR018W 1821 nt2.7□□□□□ -1.98
PDH1Q12428 UBP14YBR058C 2346 nt2.69□□□□□ -1.98
PDH1Q12428 SKT5YBL061C 2091 nt2.69□□□□□ -1.98
PDH1Q12428 HAA1YPR008W 2085 nt2.69□□□□□ -1.98
PDH1Q12428 RTR2YDR066C 591 nt2.69□□□□□ -1.98
PDH1Q12428 SEN15YMR059W 387 nt2.69□□□□□ -1.98
PDH1Q12428 GYP7YDL234C 2241 nt2.69□□□□□ -1.98
PDH1Q12428 ATG13YPR185W 2217 nt2.69□□□□□ -1.98
PDH1Q12428 COG3YER157W 2406 nt2.69□□□□□ -1.98
PDH1Q12428 BFR1YOR198C 1413 nt2.68□□□□□ -1.98
PDH1Q12428 YBT1YLL048C 4986 nt2.68□□□□□ -1.98
PDH1Q12428 BIG1YHR101C 1008 nt2.68□□□□□ -1.98
PDH1Q12428 YKL068W-AYKL068W-A 237 nt2.68□□□□□ -1.98
PDH1Q12428 AIM29YKR074W 468 nt2.68□□□□□ -1.98
PDH1Q12428 EMC6YLL014W 327 nt2.68□□□□□ -1.98
PDH1Q12428 YLR334CYLR334C 381 nt2.68□□□□□ -1.98
PDH1Q12428 RPS1AYLR441C 768 nt2.68□□□□□ -1.98
PDH1Q12428 YMR153C-AYMR153C-A 336 nt2.68□□□□□ -1.98
PDH1Q12428 YNL046WYNL046W 519 nt2.68□□□□□ -1.98
PDH1Q12428 ISU1YPL135W 498 nt2.68□□□□□ -1.98
PDH1Q12428 MUD2YKL074C 1584 nt2.68□□□□□ -1.98
PDH1Q12428 YKR078WYKR078W 1758 nt2.68□□□□□ -1.98
PDH1Q12428 STE11YLR362W 2154 nt2.68□□□□□ -1.98
PDH1Q12428 DBP7YKR024C 2229 nt2.68□□□□□ -1.98
PDH1Q12428 OSW7YFR039C 1533 nt2.68□□□□□ -1.98
PDH1Q12428 snR76snR76 109 nt2.67□□□□□ -1.98
PDH1Q12428 YHR032W-AYHR032W-A 180 nt2.67□□□□□ -1.98
PDH1Q12428 YLR302CYLR302C 363 nt2.67□□□□□ -1.98
PDH1Q12428 JIP3YLR331C 378 nt2.67□□□□□ -1.98
PDH1Q12428 YMR001C-AYMR001C-A 231 nt2.67□□□□□ -1.98
PDH1Q12428 SIP3YNL257C 3690 nt2.67□□□□□ -1.98
PDH1Q12428 TOP2YNL088W 4287 nt2.67□□□□□ -1.98
PDH1Q12428 SRC1YML034W 2505 nt2.67□□□□□ -1.98
PDH1Q12428 TFC4YGR047C 3078 nt2.67□□□□□ -1.98
PDH1Q12428 YDR098C-BYDR098C-B 5268 nt2.67□□□□□ -1.98
PDH1Q12428 YDR210C-DYDR210C-D 5268 nt2.67□□□□□ -1.98
PDH1Q12428 YDR316W-BYDR316W-B 5268 nt2.67□□□□□ -1.98
PDH1Q12428 YDR365W-BYDR365W-B 5268 nt2.67□□□□□ -1.98
PDH1Q12428 YER138CYER138C 5268 nt2.67□□□□□ -1.98
PDH1Q12428 YER160CYER160C 5268 nt2.67□□□□□ -1.98
PDH1Q12428 YGR038C-BYGR038C-B 5268 nt2.67□□□□□ -1.98
PDH1Q12428 YGR161C-DYGR161C-D 5268 nt2.67□□□□□ -1.98
PDH1Q12428 YJR027WYJR027W 5268 nt2.67□□□□□ -1.98
PDH1Q12428 YLR157C-BYLR157C-B 5268 nt2.67□□□□□ -1.98
PDH1Q12428 YML039WYML039W 5268 nt2.67□□□□□ -1.98
PDH1Q12428 YML045WYML045W 5268 nt2.67□□□□□ -1.98
PDH1Q12428 YMR050CYMR050C 5268 nt2.67□□□□□ -1.98
PDH1Q12428 YOL103W-BYOL103W-B 5268 nt2.67□□□□□ -1.98
PDH1Q12428 YBR012W-BYBR012W-B 5271 nt2.67□□□□□ -1.98
PDH1Q12428 YOR142W-BYOR142W-B 5268 nt2.67□□□□□ -1.98
PDH1Q12428 YPL257W-BYPL257W-B 5268 nt2.67□□□□□ -1.98
PDH1Q12428 YPR158W-BYPR158W-B 5271 nt2.67□□□□□ -1.98
PDH1Q12428 PUF4YGL014W 2667 nt2.66□□□□□ -1.98
PDH1Q12428 SDC25YLL016W 3147 nt2.66□□□□□ -1.98
PDH1Q12428 ISW1YBR245C 3390 nt2.66□□□□□ -1.98
PDH1Q12428 YCR081C-AYCR081C-A 237 nt2.66□□□□□ -1.98
PDH1Q12428 HUR1YGL168W 333 nt2.66□□□□□ -1.98
PDH1Q12428 RTS3YGR161C 792 nt2.66□□□□□ -1.98
PDH1Q12428 YHR125WYHR125W 306 nt2.66□□□□□ -1.98
PDH1Q12428 YLR406C-AYLR406C-A 150 nt2.66□□□□□ -1.98
PDH1Q12428 YML108WYML108W 318 nt2.66□□□□□ -1.98
PDH1Q12428 ESF2YNR054C 951 nt2.66□□□□□ -1.98
PDH1Q12428 YPL034WYPL034W 498 nt2.66□□□□□ -1.98
PDH1Q12428 snR54snR54 86 nt2.66□□□□□ -1.98
PDH1Q12428 PPN1YDR452W 2025 nt2.66□□□□□ -1.98
PDH1Q12428 ECM29YHL030W 5607 nt2.65□□□□□ -1.98
PDH1Q12428 HHT2YNL031C 411 nt2.65□□□□□ -1.99
PDH1Q12428 CRS5YOR031W 210 nt2.65□□□□□ -1.99
PDH1Q12428 IRC16YPR038W 360 nt2.65□□□□□ -1.99
PDH1Q12428 AYT1YLL063C 1425 nt2.65□□□□□ -1.99
PDH1Q12428 PTP3YER075C 2787 nt2.64□□□□□ -1.99
PDH1Q12428 GPI19YDR437W 423 nt2.64□□□□□ -1.99
PDH1Q12428 GIM4YEL003W 336 nt2.64□□□□□ -1.99
PDH1Q12428 YER038W-AYER038W-A 381 nt2.64□□□□□ -1.99
PDH1Q12428 RRT13YER066W 558 nt2.64□□□□□ -1.99
PDH1Q12428 IES5YER092W 378 nt2.64□□□□□ -1.99
PDH1Q12428 YER189WYER189W 369 nt2.64□□□□□ -1.99
PDH1Q12428 YHL046W-AYHL046W-A 327 nt2.64□□□□□ -1.99
PDH1Q12428 NOP15YNL110C 663 nt2.64□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 31.2 ms