Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN6P56747 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN6P56747 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.76■□□□□ 0.75
CLDN6P56747 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN6P56747 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CLDN6P56747 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN6P56747 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN6P56747 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN6P56747 AC087499.1-201ENST00000418141 1075 ntBASIC19.76■□□□□ 0.75
CLDN6P56747 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.76■□□□□ 0.75
CLDN6P56747 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN6P56747 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.76■□□□□ 0.75
CLDN6P56747 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.76■□□□□ 0.75
CLDN6P56747 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.76■□□□□ 0.75
CLDN6P56747 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN6P56747 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.76■□□□□ 0.75
CLDN6P56747 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.76■□□□□ 0.75
CLDN6P56747 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN6P56747 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.76■□□□□ 0.75
CLDN6P56747 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CLDN6P56747 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN6P56747 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.76■□□□□ 0.75
CLDN6P56747 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN6P56747 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN6P56747 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
CLDN6P56747 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN6P56747 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN6P56747 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN6P56747 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN6P56747 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN6P56747 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.75■□□□□ 0.75
CLDN6P56747 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.75■□□□□ 0.75
CLDN6P56747 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.75■□□□□ 0.75
CLDN6P56747 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN6P56747 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.75■□□□□ 0.75
CLDN6P56747 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN6P56747 AC239809.2-201ENST00000415381 517 ntBASIC19.75■□□□□ 0.75
CLDN6P56747 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.75■□□□□ 0.75
CLDN6P56747 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.75■□□□□ 0.75
CLDN6P56747 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.75■□□□□ 0.75
CLDN6P56747 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN6P56747 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN6P56747 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN6P56747 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN6P56747 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CLDN6P56747 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN6P56747 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.74■□□□□ 0.75
CLDN6P56747 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN6P56747 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CLDN6P56747 KRASP1-201ENST00000407852 552 ntBASIC19.74■□□□□ 0.75
CLDN6P56747 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CLDN6P56747 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.74■□□□□ 0.75
CLDN6P56747 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.74■□□□□ 0.75
CLDN6P56747 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.74■□□□□ 0.75
CLDN6P56747 C2orf69P4-201ENST00000565394 541 ntBASIC19.74■□□□□ 0.75
CLDN6P56747 AC113410.3-201ENST00000623366 203 ntBASIC19.74■□□□□ 0.75
CLDN6P56747 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN6P56747 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
CLDN6P56747 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.74■□□□□ 0.75
CLDN6P56747 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN6P56747 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLDN6P56747 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.73■□□□□ 0.75
CLDN6P56747 C1orf229-201ENST00000623686 2258 ntBASIC19.73■□□□□ 0.75
CLDN6P56747 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CLDN6P56747 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN6P56747 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN6P56747 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN6P56747 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN6P56747 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN6P56747 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN6P56747 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN6P56747 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN6P56747 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CLDN6P56747 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.73■□□□□ 0.75
CLDN6P56747 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN6P56747 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN6P56747 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN6P56747 FAM99A-202ENST00000538190 1989 ntBASIC19.73■□□□□ 0.75
CLDN6P56747 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN6P56747 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN6P56747 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN6P56747 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN6P56747 KRT17P2-201ENST00000300992 1314 ntBASIC19.73■□□□□ 0.75
CLDN6P56747 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN6P56747 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.72■□□□□ 0.75
CLDN6P56747 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN6P56747 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.72■□□□□ 0.75
CLDN6P56747 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN6P56747 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN6P56747 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN6P56747 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN6P56747 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.72■□□□□ 0.75
CLDN6P56747 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.72■□□□□ 0.75
CLDN6P56747 RCN1P1-201ENST00000400413 996 ntBASIC19.72■□□□□ 0.75
CLDN6P56747 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.72■□□□□ 0.75
CLDN6P56747 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN6P56747 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.72■□□□□ 0.75
CLDN6P56747 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN6P56747 AL355075.4-201ENST00000554988 638 ntBASIC19.72■□□□□ 0.75
CLDN6P56747 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms