Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH15P55291 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH15P55291 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH15P55291 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH15P55291 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDH15P55291 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.07■□□□□ 0.64
CDH15P55291 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH15P55291 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CDH15P55291 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH15P55291 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CDH15P55291 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH15P55291 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDH15P55291 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH15P55291 AL158211.5-201ENST00000623583 2518 ntBASIC19.07■□□□□ 0.64
CDH15P55291 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH15P55291 AC003102.1-202ENST00000563394 1796 ntBASIC19.06■□□□□ 0.64
CDH15P55291 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH15P55291 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH15P55291 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH15P55291 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH15P55291 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH15P55291 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.06■□□□□ 0.64
CDH15P55291 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDH15P55291 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDH15P55291 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CDH15P55291 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH15P55291 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH15P55291 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDH15P55291 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH15P55291 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH15P55291 AC121338.2-201ENST00000622535 1744 ntBASIC19.05■□□□□ 0.64
CDH15P55291 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH15P55291 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CDH15P55291 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH15P55291 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH15P55291 LETM1P2-201ENST00000597330 2178 ntBASIC19.05■□□□□ 0.64
CDH15P55291 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH15P55291 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.05■□□□□ 0.64
CDH15P55291 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH15P55291 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.05■□□□□ 0.64
CDH15P55291 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.05■□□□□ 0.64
CDH15P55291 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.05■□□□□ 0.64
CDH15P55291 NEFHP1-201ENST00000412845 2629 ntBASIC19.05■□□□□ 0.64
CDH15P55291 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH15P55291 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH15P55291 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.05■□□□□ 0.64
CDH15P55291 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH15P55291 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH15P55291 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CDH15P55291 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDH15P55291 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH15P55291 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH15P55291 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH15P55291 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH15P55291 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CDH15P55291 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.04■□□□□ 0.64
CDH15P55291 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
CDH15P55291 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.04■□□□□ 0.64
CDH15P55291 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.04■□□□□ 0.64
CDH15P55291 AL031432.3-201ENST00000607698 485 ntBASIC19.04■□□□□ 0.64
CDH15P55291 AL031602.1-201ENST00000633169 911 ntBASIC19.04■□□□□ 0.64
CDH15P55291 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH15P55291 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH15P55291 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.04■□□□□ 0.64
CDH15P55291 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH15P55291 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH15P55291 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH15P55291 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH15P55291 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH15P55291 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CDH15P55291 AC009102.2-201ENST00000606772 1639 ntBASIC19.03■□□□□ 0.64
CDH15P55291 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH15P55291 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.03■□□□□ 0.64
CDH15P55291 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CDH15P55291 EDA-201ENST00000338901 1233 ntBASIC19.03■□□□□ 0.64
CDH15P55291 ZNRF2P3-201ENST00000424200 374 ntBASIC19.03■□□□□ 0.64
CDH15P55291 SUDS3P1-201ENST00000505831 966 ntBASIC19.03■□□□□ 0.64
CDH15P55291 AC024257.2-201ENST00000549699 147 ntBASIC19.03■□□□□ 0.64
CDH15P55291 DUX4L19-201ENST00000557448 1267 ntBASIC19.03■□□□□ 0.64
CDH15P55291 AC092171.4-201ENST00000609130 632 ntBASIC19.03■□□□□ 0.64
CDH15P55291 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.03■□□□□ 0.64
CDH15P55291 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.03■□□□□ 0.64
CDH15P55291 AC125437.2-201ENST00000625180 2167 ntBASIC19.03■□□□□ 0.64
CDH15P55291 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH15P55291 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH15P55291 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDH15P55291 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.02■□□□□ 0.64
CDH15P55291 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.02■□□□□ 0.64
CDH15P55291 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CDH15P55291 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.02■□□□□ 0.64
CDH15P55291 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.02■□□□□ 0.64
CDH15P55291 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH15P55291 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CDH15P55291 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH15P55291 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CDH15P55291 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.02■□□□□ 0.64
CDH15P55291 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH15P55291 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH15P55291 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH15P55291 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms