Protein–RNA interactions for Protein: P49686

NUP42, Nucleoporin NUP42, yeastyeast

Known RBP Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP42P49686 STM1YLR150W 822 nt4.48□□□□□ -1.69
NUP42P49686 YLR154W-BYLR154W-B 165 nt4.48□□□□□ -1.69
NUP42P49686 YNL028WYNL028W 318 nt4.48□□□□□ -1.69
NUP42P49686 RPS9AYPL081W 594 nt4.48□□□□□ -1.69
NUP42P49686 TIM12YBR091C 330 nt4.48□□□□□ -1.69
NUP42P49686 CWH43YCR017C 2862 nt4.48□□□□□ -1.69
NUP42P49686 GCD6YDR211W 2139 nt4.48□□□□□ -1.69
NUP42P49686 YDR034C-DYDR034C-D 5313 nt4.48□□□□□ -1.69
NUP42P49686 MSH1YHR120W 2880 nt4.47□□□□□ -1.69
NUP42P49686 EXO84YBR102C 2262 nt4.47□□□□□ -1.69
NUP42P49686 NPC2YDL046W 522 nt4.47□□□□□ -1.69
NUP42P49686 RPS23AYGR118W 438 nt4.47□□□□□ -1.69
NUP42P49686 IGO2YHR132W-A 396 nt4.47□□□□□ -1.69
NUP42P49686 YJL222W-BYJL222W-B 138 nt4.47□□□□□ -1.69
NUP42P49686 YML116W-AYML116W-A 303 nt4.47□□□□□ -1.69
NUP42P49686 PHO8YDR481C 1701 nt4.46□□□□□ -1.69
NUP42P49686 RNR1YER070W 2667 nt4.46□□□□□ -1.7
NUP42P49686 NSP1YJL041W 2472 nt4.46□□□□□ -1.7
NUP42P49686 SKT5YBL061C 2091 nt4.46□□□□□ -1.7
NUP42P49686 YAL044W-AYAL044W-A 333 nt4.46□□□□□ -1.7
NUP42P49686 FBP1YLR377C 1047 nt4.46□□□□□ -1.7
NUP42P49686 IOC2YLR095C 2439 nt4.46□□□□□ -1.7
NUP42P49686 YLR352WYLR352W 2424 nt4.46□□□□□ -1.7
NUP42P49686 YBL083CYBL083C 426 nt4.45□□□□□ -1.7
NUP42P49686 DIS3YOL021C 3006 nt4.45□□□□□ -1.7
NUP42P49686 PUF6YDR496C 1971 nt4.44□□□□□ -1.7
NUP42P49686 ERB1YMR049C 2424 nt4.44□□□□□ -1.7
NUP42P49686 VBA4YDR119W 2307 nt4.44□□□□□ -1.7
NUP42P49686 SSE1YPL106C 2082 nt4.44□□□□□ -1.7
NUP42P49686 PKC1YBL105C 3456 nt4.44□□□□□ -1.7
NUP42P49686 PEX1YKL197C 3132 nt4.43□□□□□ -1.7
NUP42P49686 YPR003CYPR003C 2265 nt4.43□□□□□ -1.7
NUP42P49686 PRP22YER013W 3438 nt4.43□□□□□ -1.7
NUP42P49686 COF1YLL050C 432 nt4.42□□□□□ -1.7
NUP42P49686 RPL38YLR325C 237 nt4.42□□□□□ -1.7
NUP42P49686 HOR7YMR251W-A 180 nt4.42□□□□□ -1.7
NUP42P49686 MRK1YDL079C 1506 nt4.41□□□□□ -1.7
NUP42P49686 DSF1YEL070W 1509 nt4.41□□□□□ -1.7
NUP42P49686 MCH4YOL119C 1506 nt4.41□□□□□ -1.7
NUP42P49686 YDR187CYDR187C 519 nt4.41□□□□□ -1.7
NUP42P49686 YRA1YDR381W 681 nt4.41□□□□□ -1.7
NUP42P49686 YGR051CYGR051C 324 nt4.41□□□□□ -1.7
NUP42P49686 PCC1YKR095W-A 267 nt4.41□□□□□ -1.7
NUP42P49686 RRT15YLR162W-A 189 nt4.41□□□□□ -1.7
NUP42P49686 HOS3YPL116W 2094 nt4.41□□□□□ -1.7
NUP42P49686 ACC1YNR016C 6702 nt4.4□□□□□ -1.7
NUP42P49686 HPF1YOL155C 2904 nt4.4□□□□□ -1.7
NUP42P49686 YMR31YFR049W 372 nt4.4□□□□□ -1.71
NUP42P49686 tR(ACG)DtR(ACG)D 73 nt4.4□□□□□ -1.71
NUP42P49686 tR(ACG)EtR(ACG)E 73 nt4.4□□□□□ -1.71
NUP42P49686 tR(ACG)KtR(ACG)K 73 nt4.4□□□□□ -1.71
NUP42P49686 tR(ACG)LtR(ACG)L 73 nt4.4□□□□□ -1.71
NUP42P49686 tR(ACG)OtR(ACG)O 73 nt4.4□□□□□ -1.71
NUP42P49686 SCS7YMR272C 1155 nt4.4□□□□□ -1.71
NUP42P49686 MRPL33YMR286W 261 nt4.4□□□□□ -1.71
NUP42P49686 YBR121C-AYBR121C-A 159 nt4.4□□□□□ -1.71
NUP42P49686 MYO5YMR109W 3660 nt4.4□□□□□ -1.71
NUP42P49686 SOK1YDR006C 2706 nt4.4□□□□□ -1.71
NUP42P49686 CAF4YKR036C 1932 nt4.4□□□□□ -1.71
NUP42P49686 OSW2YLR054C 2175 nt4.4□□□□□ -1.71
NUP42P49686 CDC20YGL116W 1833 nt4.39□□□□□ -1.71
NUP42P49686 YMR321CYMR321C 318 nt4.39□□□□□ -1.71
NUP42P49686 CSE2YNR010W 450 nt4.39□□□□□ -1.71
NUP42P49686 SIZ1YDR409W 2715 nt4.39□□□□□ -1.71
NUP42P49686 YGL036WYGL036W 2730 nt4.39□□□□□ -1.71
NUP42P49686 NOP4YPL043W 2058 nt4.39□□□□□ -1.71
NUP42P49686 FAR1YJL157C 2493 nt4.38□□□□□ -1.71
NUP42P49686 DLS1YJL065C 504 nt4.38□□□□□ -1.71
NUP42P49686 TCO89YPL180W 2400 nt4.38□□□□□ -1.71
NUP42P49686 POM152YMR129W 4014 nt4.37□□□□□ -1.71
NUP42P49686 MET10YFR030W 3108 nt4.37□□□□□ -1.71
NUP42P49686 VPS3YDR495C 3036 nt4.37□□□□□ -1.71
NUP42P49686 YLR120W-AYLR120W-A 102 nt4.37□□□□□ -1.71
NUP42P49686 YLR154W-EYLR154W-E 204 nt4.37□□□□□ -1.71
NUP42P49686 YMR122CYMR122C 375 nt4.37□□□□□ -1.71
NUP42P49686 RPL20BYOR312C 519 nt4.37□□□□□ -1.71
NUP42P49686 YPL260WYPL260W 1656 nt4.37□□□□□ -1.71
NUP42P49686 SSY5YJL156C 2100 nt4.37□□□□□ -1.71
NUP42P49686 DFG16YOR030W 1860 nt4.37□□□□□ -1.71
NUP42P49686 YDR210W-BYDR210W-B 5313 nt4.36□□□□□ -1.71
NUP42P49686 YDR261W-BYDR261W-B 5313 nt4.36□□□□□ -1.71
NUP42P49686 YFL002W-AYFL002W-A 5313 nt4.36□□□□□ -1.71
NUP42P49686 YGR161W-BYGR161W-B 5313 nt4.36□□□□□ -1.71
NUP42P49686 YLR410W-BYLR410W-B 5313 nt4.36□□□□□ -1.71
NUP42P49686 YCL019WYCL019W 5313 nt4.36□□□□□ -1.71
NUP42P49686 MRP10YDL045W-A 288 nt4.36□□□□□ -1.71
NUP42P49686 MTC3YGL226W 372 nt4.36□□□□□ -1.71
NUP42P49686 RLF2YPR018W 1821 nt4.36□□□□□ -1.71
NUP42P49686 ABP140YOR239W 1887 nt4.36□□□□□ -1.71
NUP42P49686 PSK2YOL045W 3306 nt4.36□□□□□ -1.71
NUP42P49686 HAP1YLR256W 4509 nt4.35□□□□□ -1.71
NUP42P49686 APC2YLR127C 2562 nt4.35□□□□□ -1.71
NUP42P49686 QCR7YDR529C 384 nt4.35□□□□□ -1.71
NUP42P49686 YGL024WYGL024W 336 nt4.35□□□□□ -1.71
NUP42P49686 YGL074CYGL074C 327 nt4.35□□□□□ -1.71
NUP42P49686 RAM2YKL019W 951 nt4.35□□□□□ -1.71
NUP42P49686 DAL82YNL314W 768 nt4.35□□□□□ -1.71
NUP42P49686 YNR042WYNR042W 429 nt4.35□□□□□ -1.71
NUP42P49686 RPS15YOL040C 429 nt4.35□□□□□ -1.71
NUP42P49686 BRE4YDL231C 3378 nt4.35□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 49.2 ms