Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 MIR935-201ENST00000401179 91 ntBASIC18.13■□□□□ 0.49
SRP9P49458 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.13■□□□□ 0.49
SRP9P49458 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.13■□□□□ 0.49
SRP9P49458 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.13■□□□□ 0.49
SRP9P49458 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.13■□□□□ 0.49
SRP9P49458 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.13■□□□□ 0.49
SRP9P49458 AC112907.3-201ENST00000577781 2400 ntBASIC18.13■□□□□ 0.49
SRP9P49458 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SRP9P49458 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SRP9P49458 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SRP9P49458 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRP9P49458 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.13■□□□□ 0.49
SRP9P49458 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRP9P49458 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SRP9P49458 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SRP9P49458 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
SRP9P49458 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRP9P49458 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRP9P49458 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRP9P49458 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.12■□□□□ 0.49
SRP9P49458 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.12■□□□□ 0.49
SRP9P49458 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRP9P49458 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.12■□□□□ 0.49
SRP9P49458 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.12■□□□□ 0.49
SRP9P49458 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.12■□□□□ 0.49
SRP9P49458 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.12■□□□□ 0.49
SRP9P49458 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRP9P49458 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRP9P49458 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.12■□□□□ 0.49
SRP9P49458 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRP9P49458 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRP9P49458 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.12■□□□□ 0.49
SRP9P49458 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SRP9P49458 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.12■□□□□ 0.49
SRP9P49458 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRP9P49458 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
SRP9P49458 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SRP9P49458 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SRP9P49458 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.11■□□□□ 0.49
SRP9P49458 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SRP9P49458 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SRP9P49458 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRP9P49458 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.11■□□□□ 0.49
SRP9P49458 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRP9P49458 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.11■□□□□ 0.49
SRP9P49458 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.11■□□□□ 0.49
SRP9P49458 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRP9P49458 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.11■□□□□ 0.49
SRP9P49458 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRP9P49458 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRP9P49458 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SRP9P49458 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.11■□□□□ 0.49
SRP9P49458 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SRP9P49458 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.11■□□□□ 0.49
SRP9P49458 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SRP9P49458 AC079140.4-201ENST00000507448 529 ntBASIC18.11■□□□□ 0.49
SRP9P49458 KRT18P14-201ENST00000534205 1250 ntBASIC18.11■□□□□ 0.49
SRP9P49458 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.11■□□□□ 0.49
SRP9P49458 CCDC92B-201ENST00000575506 885 ntBASIC18.11■□□□□ 0.49
SRP9P49458 TERF1P2-201ENST00000583350 1212 ntBASIC18.11■□□□□ 0.49
SRP9P49458 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SRP9P49458 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SRP9P49458 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.11■□□□□ 0.49
SRP9P49458 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRP9P49458 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.11■□□□□ 0.49
SRP9P49458 AC055733.4-201ENST00000638462 1354 ntBASIC18.11■□□□□ 0.49
SRP9P49458 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
SRP9P49458 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.11■□□□□ 0.49
SRP9P49458 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SRP9P49458 AC006128.1-201ENST00000624704 1661 ntBASIC18.11■□□□□ 0.49
SRP9P49458 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.11■□□□□ 0.49
SRP9P49458 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.11■□□□□ 0.49
SRP9P49458 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SRP9P49458 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.11■□□□□ 0.49
SRP9P49458 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRP9P49458 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.11■□□□□ 0.49
SRP9P49458 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SRP9P49458 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRP9P49458 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SRP9P49458 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SRP9P49458 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SRP9P49458 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SRP9P49458 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRP9P49458 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRP9P49458 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRP9P49458 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.1■□□□□ 0.49
SRP9P49458 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SRP9P49458 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRP9P49458 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.1■□□□□ 0.49
SRP9P49458 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.1■□□□□ 0.49
SRP9P49458 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SRP9P49458 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SRP9P49458 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRP9P49458 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SRP9P49458 AC034268.1-201ENST00000441047 882 ntBASIC18.1■□□□□ 0.49
SRP9P49458 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.1■□□□□ 0.49
SRP9P49458 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.1■□□□□ 0.49
SRP9P49458 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.1■□□□□ 0.49
SRP9P49458 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRP9P49458 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms