Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT20P35900 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT20P35900 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT20P35900 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
KRT20P35900 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.42■□□□□ 0.7
KRT20P35900 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.42■□□□□ 0.7
KRT20P35900 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.42■□□□□ 0.7
KRT20P35900 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
KRT20P35900 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KRT20P35900 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KRT20P35900 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.42■□□□□ 0.7
KRT20P35900 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
KRT20P35900 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.42■□□□□ 0.7
KRT20P35900 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.42■□□□□ 0.7
KRT20P35900 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
KRT20P35900 AC010141.2-201ENST00000452426 721 ntBASIC19.42■□□□□ 0.7
KRT20P35900 AP001160.3-201ENST00000601484 763 ntBASIC19.42■□□□□ 0.7
KRT20P35900 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.42■□□□□ 0.7
KRT20P35900 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT20P35900 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
KRT20P35900 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT20P35900 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT20P35900 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT20P35900 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT20P35900 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT20P35900 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT20P35900 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT20P35900 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT20P35900 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT20P35900 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT20P35900 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT20P35900 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.41■□□□□ 0.7
KRT20P35900 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT20P35900 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
KRT20P35900 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KRT20P35900 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KRT20P35900 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KRT20P35900 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.41■□□□□ 0.7
KRT20P35900 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.41■□□□□ 0.7
KRT20P35900 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT20P35900 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT20P35900 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT20P35900 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
KRT20P35900 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KRT20P35900 KRT18P5-201ENST00000436075 1291 ntBASIC19.41■□□□□ 0.7
KRT20P35900 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.41■□□□□ 0.7
KRT20P35900 AL162430.1-201ENST00000480705 870 ntBASIC19.41■□□□□ 0.7
KRT20P35900 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KRT20P35900 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.41■□□□□ 0.7
KRT20P35900 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
KRT20P35900 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.41■□□□□ 0.7
KRT20P35900 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.41■□□□□ 0.7
KRT20P35900 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT20P35900 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
KRT20P35900 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT20P35900 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT20P35900 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT20P35900 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
KRT20P35900 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT20P35900 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT20P35900 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT20P35900 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.4■□□□□ 0.7
KRT20P35900 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.4■□□□□ 0.7
KRT20P35900 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.4■□□□□ 0.7
KRT20P35900 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.4■□□□□ 0.7
KRT20P35900 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.4■□□□□ 0.7
KRT20P35900 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.4■□□□□ 0.7
KRT20P35900 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.4■□□□□ 0.7
KRT20P35900 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT20P35900 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT20P35900 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
KRT20P35900 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT20P35900 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.4■□□□□ 0.7
KRT20P35900 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
KRT20P35900 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT20P35900 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT20P35900 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT20P35900 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
KRT20P35900 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
KRT20P35900 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
KRT20P35900 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.39■□□□□ 0.7
KRT20P35900 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
KRT20P35900 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT20P35900 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT20P35900 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
KRT20P35900 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.39■□□□□ 0.69
KRT20P35900 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT20P35900 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.39■□□□□ 0.69
KRT20P35900 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT20P35900 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.39■□□□□ 0.69
KRT20P35900 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT20P35900 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.39■□□□□ 0.69
KRT20P35900 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
KRT20P35900 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.39■□□□□ 0.69
KRT20P35900 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT20P35900 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.39■□□□□ 0.69
KRT20P35900 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
KRT20P35900 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
KRT20P35900 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT20P35900 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms