Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC116050.2-201ENST00000612102 1779 ntBASIC19.51■□□□□ 0.71
RORAP35398 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.51■□□□□ 0.71
RORAP35398 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RORAP35398 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.51■□□□□ 0.71
RORAP35398 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RORAP35398 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RORAP35398 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RORAP35398 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RORAP35398 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.5■□□□□ 0.71
RORAP35398 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.5■□□□□ 0.71
RORAP35398 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RORAP35398 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RORAP35398 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RORAP35398 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RORAP35398 CYP21A1P-202ENST00000354927 1481 ntBASIC19.5■□□□□ 0.71
RORAP35398 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.5■□□□□ 0.71
RORAP35398 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RORAP35398 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RORAP35398 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.5■□□□□ 0.71
RORAP35398 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RORAP35398 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RORAP35398 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RORAP35398 KRT18P68-201ENST00000392293 1000 ntBASIC19.5■□□□□ 0.71
RORAP35398 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RORAP35398 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
RORAP35398 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.5■□□□□ 0.71
RORAP35398 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.5■□□□□ 0.71
RORAP35398 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
RORAP35398 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RORAP35398 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RORAP35398 Z98882.1-201ENST00000622160 2253 ntBASIC19.5■□□□□ 0.71
RORAP35398 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RORAP35398 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RORAP35398 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.5■□□□□ 0.71
RORAP35398 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RORAP35398 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RORAP35398 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RORAP35398 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RORAP35398 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RORAP35398 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RORAP35398 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RORAP35398 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RORAP35398 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RORAP35398 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RORAP35398 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.49■□□□□ 0.71
RORAP35398 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.49■□□□□ 0.71
RORAP35398 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.49■□□□□ 0.71
RORAP35398 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.49■□□□□ 0.71
RORAP35398 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
RORAP35398 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.49■□□□□ 0.71
RORAP35398 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RORAP35398 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RORAP35398 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.49■□□□□ 0.71
RORAP35398 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.49■□□□□ 0.71
RORAP35398 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RORAP35398 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RORAP35398 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RORAP35398 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RORAP35398 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RORAP35398 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RORAP35398 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.48■□□□□ 0.71
RORAP35398 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.48■□□□□ 0.71
RORAP35398 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RORAP35398 ESRRAP1-201ENST00000400596 1257 ntBASIC19.48■□□□□ 0.71
RORAP35398 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.48■□□□□ 0.71
RORAP35398 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
RORAP35398 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.48■□□□□ 0.71
RORAP35398 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
RORAP35398 AC008687.6-201ENST00000596318 630 ntBASIC19.48■□□□□ 0.71
RORAP35398 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RORAP35398 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.48■□□□□ 0.71
RORAP35398 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.48■□□□□ 0.71
RORAP35398 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RORAP35398 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.48■□□□□ 0.71
RORAP35398 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RORAP35398 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RORAP35398 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.48■□□□□ 0.71
RORAP35398 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RORAP35398 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RORAP35398 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
RORAP35398 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
RORAP35398 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RORAP35398 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.48■□□□□ 0.71
RORAP35398 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RORAP35398 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
RORAP35398 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.47■□□□□ 0.71
RORAP35398 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RORAP35398 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.47■□□□□ 0.71
RORAP35398 PRORSD1P-201ENST00000295112 541 ntBASIC19.47■□□□□ 0.71
RORAP35398 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.47■□□□□ 0.71
RORAP35398 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RORAP35398 KRT18P29-201ENST00000397031 1267 ntBASIC19.47■□□□□ 0.71
RORAP35398 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RORAP35398 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.47■□□□□ 0.71
RORAP35398 UNC93B5-201ENST00000530315 699 ntBASIC19.47■□□□□ 0.71
RORAP35398 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.47■□□□□ 0.71
RORAP35398 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.47■□□□□ 0.71
RORAP35398 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RORAP35398 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RORAP35398 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms