Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
ABCA1O95477 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ABCA1O95477 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ABCA1O95477 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ABCA1O95477 MCRIP2P1-201ENST00000394346 511 ntBASIC17.17■□□□□ 0.34
ABCA1O95477 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ABCA1O95477 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ABCA1O95477 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.17■□□□□ 0.34
ABCA1O95477 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.17■□□□□ 0.34
ABCA1O95477 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.17■□□□□ 0.34
ABCA1O95477 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ABCA1O95477 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
ABCA1O95477 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ABCA1O95477 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ABCA1O95477 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ABCA1O95477 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
ABCA1O95477 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ABCA1O95477 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ABCA1O95477 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.16■□□□□ 0.34
ABCA1O95477 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ABCA1O95477 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.16■□□□□ 0.34
ABCA1O95477 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.16■□□□□ 0.34
ABCA1O95477 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.16■□□□□ 0.34
ABCA1O95477 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ABCA1O95477 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ABCA1O95477 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.16■□□□□ 0.34
ABCA1O95477 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
ABCA1O95477 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ABCA1O95477 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ABCA1O95477 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ABCA1O95477 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ABCA1O95477 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ABCA1O95477 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ABCA1O95477 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ABCA1O95477 BX088651.1-201ENST00000540551 451 ntBASIC17.16■□□□□ 0.34
ABCA1O95477 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ABCA1O95477 HLA-B-256ENST00000639848 1089 ntBASIC17.16■□□□□ 0.34
ABCA1O95477 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ABCA1O95477 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ABCA1O95477 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ABCA1O95477 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ABCA1O95477 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ABCA1O95477 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ABCA1O95477 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ABCA1O95477 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ABCA1O95477 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
ABCA1O95477 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ABCA1O95477 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ABCA1O95477 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.15■□□□□ 0.34
ABCA1O95477 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.15■□□□□ 0.34
ABCA1O95477 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ABCA1O95477 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ABCA1O95477 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.34
ABCA1O95477 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.14■□□□□ 0.33
ABCA1O95477 AC245052.3-201ENST00000450182 901 ntBASIC17.14■□□□□ 0.33
ABCA1O95477 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.14■□□□□ 0.33
ABCA1O95477 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.14■□□□□ 0.33
ABCA1O95477 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.14■□□□□ 0.33
ABCA1O95477 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ABCA1O95477 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
ABCA1O95477 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ABCA1O95477 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.14■□□□□ 0.33
ABCA1O95477 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.14■□□□□ 0.33
ABCA1O95477 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ABCA1O95477 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ABCA1O95477 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ABCA1O95477 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
ABCA1O95477 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.14■□□□□ 0.33
ABCA1O95477 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.14■□□□□ 0.33
ABCA1O95477 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ABCA1O95477 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ABCA1O95477 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ABCA1O95477 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ABCA1O95477 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.13■□□□□ 0.33
ABCA1O95477 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.13■□□□□ 0.33
ABCA1O95477 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCA1O95477 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.13■□□□□ 0.33
ABCA1O95477 AC091799.1-201ENST00000422823 811 ntBASIC17.13■□□□□ 0.33
ABCA1O95477 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.13■□□□□ 0.33
ABCA1O95477 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ABCA1O95477 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ABCA1O95477 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.13■□□□□ 0.33
ABCA1O95477 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.13■□□□□ 0.33
ABCA1O95477 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCA1O95477 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCA1O95477 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCA1O95477 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ABCA1O95477 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCA1O95477 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.13■□□□□ 0.33
ABCA1O95477 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.13■□□□□ 0.33
ABCA1O95477 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ABCA1O95477 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCA1O95477 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ABCA1O95477 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ABCA1O95477 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.13■□□□□ 0.33
ABCA1O95477 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.13■□□□□ 0.33
ABCA1O95477 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
ABCA1O95477 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ABCA1O95477 C11orf96-202ENST00000528572 1834 ntBASIC17.12■□□□□ 0.33
ABCA1O95477 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms