Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RTN3O95197 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.63■■□□□ 1.05
RTN3O95197 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.63■■□□□ 1.05
RTN3O95197 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.63■■□□□ 1.05
RTN3O95197 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTN3O95197 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RTN3O95197 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTN3O95197 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTN3O95197 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTN3O95197 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTN3O95197 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTN3O95197 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTN3O95197 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTN3O95197 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.62■■□□□ 1.05
RTN3O95197 KRT18P68-201ENST00000392293 1000 ntBASIC21.62■■□□□ 1.05
RTN3O95197 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
RTN3O95197 DUSP5P2-201ENST00000426873 1033 ntBASIC21.62■■□□□ 1.05
RTN3O95197 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.62■■□□□ 1.05
RTN3O95197 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.62■■□□□ 1.05
RTN3O95197 AC091874.3-201ENST00000512672 1195 ntBASIC21.62■■□□□ 1.05
RTN3O95197 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
RTN3O95197 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
RTN3O95197 AL589743.5-201ENST00000616611 1050 ntBASIC21.62■■□□□ 1.05
RTN3O95197 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
RTN3O95197 MYC-209ENST00000641252 345 ntBASIC21.62■■□□□ 1.05
RTN3O95197 CYP21A1P-202ENST00000354927 1481 ntBASIC21.62■■□□□ 1.05
RTN3O95197 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTN3O95197 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTN3O95197 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTN3O95197 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.61■■□□□ 1.05
RTN3O95197 KRT17P1-201ENST00000399211 1546 ntBASIC21.61■■□□□ 1.05
RTN3O95197 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RTN3O95197 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTN3O95197 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTN3O95197 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTN3O95197 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.61■■□□□ 1.05
RTN3O95197 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTN3O95197 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTN3O95197 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RTN3O95197 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RTN3O95197 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RTN3O95197 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
RTN3O95197 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.61■■□□□ 1.05
RTN3O95197 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTN3O95197 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RTN3O95197 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTN3O95197 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTN3O95197 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTN3O95197 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTN3O95197 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTN3O95197 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RTN3O95197 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.6■■□□□ 1.05
RTN3O95197 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
RTN3O95197 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
RTN3O95197 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTN3O95197 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.6■■□□□ 1.05
RTN3O95197 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTN3O95197 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTN3O95197 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
RTN3O95197 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTN3O95197 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.6■■□□□ 1.05
RTN3O95197 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
RTN3O95197 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.6■■□□□ 1.05
RTN3O95197 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTN3O95197 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.6■■□□□ 1.05
RTN3O95197 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTN3O95197 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.6■■□□□ 1.05
RTN3O95197 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.6■■□□□ 1.05
RTN3O95197 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.6■■□□□ 1.05
RTN3O95197 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
RTN3O95197 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTN3O95197 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.59■■□□□ 1.05
RTN3O95197 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.59■■□□□ 1.05
RTN3O95197 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
RTN3O95197 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RTN3O95197 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.59■■□□□ 1.05
RTN3O95197 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.59■■□□□ 1.05
RTN3O95197 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.59■■□□□ 1.05
RTN3O95197 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.59■■□□□ 1.05
RTN3O95197 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.59■■□□□ 1.05
RTN3O95197 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTN3O95197 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RTN3O95197 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTN3O95197 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.59■■□□□ 1.05
RTN3O95197 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RTN3O95197 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RTN3O95197 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RTN3O95197 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.58■■□□□ 1.05
RTN3O95197 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.58■■□□□ 1.05
RTN3O95197 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RTN3O95197 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
RTN3O95197 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RTN3O95197 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.58■■□□□ 1.05
RTN3O95197 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.58■■□□□ 1.05
RTN3O95197 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.58■■□□□ 1.05
RTN3O95197 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RTN3O95197 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RTN3O95197 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.58■■□□□ 1.05
RTN3O95197 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
RTN3O95197 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms