Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.08■□□□□ 0.48
SGCEO43556 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.07■□□□□ 0.48
SGCEO43556 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SGCEO43556 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SGCEO43556 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SGCEO43556 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SGCEO43556 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SGCEO43556 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.07■□□□□ 0.48
SGCEO43556 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.07■□□□□ 0.48
SGCEO43556 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.07■□□□□ 0.48
SGCEO43556 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SGCEO43556 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.07■□□□□ 0.48
SGCEO43556 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.07■□□□□ 0.48
SGCEO43556 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.07■□□□□ 0.48
SGCEO43556 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.07■□□□□ 0.48
SGCEO43556 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.07■□□□□ 0.48
SGCEO43556 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SGCEO43556 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.07■□□□□ 0.48
SGCEO43556 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SGCEO43556 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SGCEO43556 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SGCEO43556 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SGCEO43556 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SGCEO43556 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.07■□□□□ 0.48
SGCEO43556 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SGCEO43556 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGCEO43556 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGCEO43556 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.06■□□□□ 0.48
SGCEO43556 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGCEO43556 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGCEO43556 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.06■□□□□ 0.48
SGCEO43556 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SGCEO43556 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.06■□□□□ 0.48
SGCEO43556 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SGCEO43556 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGCEO43556 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGCEO43556 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.06■□□□□ 0.48
SGCEO43556 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.06■□□□□ 0.48
SGCEO43556 MIR5787-201ENST00000611784 55 ntBASIC18.06■□□□□ 0.48
SGCEO43556 AC243732.1-201ENST00000612648 864 ntBASIC18.06■□□□□ 0.48
SGCEO43556 MYCNOS-205ENST00000641950 531 ntBASIC18.06■□□□□ 0.48
SGCEO43556 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGCEO43556 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGCEO43556 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGCEO43556 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SGCEO43556 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SGCEO43556 RBM17P2-201ENST00000616397 1405 ntBASIC18.06■□□□□ 0.48
SGCEO43556 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
SGCEO43556 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
SGCEO43556 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SGCEO43556 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SGCEO43556 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SGCEO43556 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.05■□□□□ 0.48
SGCEO43556 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SGCEO43556 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SGCEO43556 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.05■□□□□ 0.48
SGCEO43556 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SGCEO43556 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SGCEO43556 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.05■□□□□ 0.48
SGCEO43556 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
SGCEO43556 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.05■□□□□ 0.48
SGCEO43556 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.05■□□□□ 0.48
SGCEO43556 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.05■□□□□ 0.48
SGCEO43556 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.05■□□□□ 0.48
SGCEO43556 AC137761.2-201ENST00000561729 223 ntBASIC18.05■□□□□ 0.48
SGCEO43556 AC145350.3-201ENST00000569033 163 ntBASIC18.05■□□□□ 0.48
SGCEO43556 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.05■□□□□ 0.48
SGCEO43556 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.05■□□□□ 0.48
SGCEO43556 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.05■□□□□ 0.48
SGCEO43556 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SGCEO43556 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.05■□□□□ 0.48
SGCEO43556 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SGCEO43556 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.05■□□□□ 0.48
SGCEO43556 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SGCEO43556 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SGCEO43556 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SGCEO43556 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SGCEO43556 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SGCEO43556 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SGCEO43556 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SGCEO43556 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SGCEO43556 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SGCEO43556 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SGCEO43556 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SGCEO43556 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.04■□□□□ 0.48
SGCEO43556 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SGCEO43556 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.04■□□□□ 0.48
SGCEO43556 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.04■□□□□ 0.48
SGCEO43556 KRT18P11-201ENST00000435214 1283 ntBASIC18.04■□□□□ 0.48
SGCEO43556 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.04■□□□□ 0.48
SGCEO43556 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SGCEO43556 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.04■□□□□ 0.48
SGCEO43556 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SGCEO43556 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
SGCEO43556 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SGCEO43556 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SGCEO43556 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SGCEO43556 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SGCEO43556 AC116050.2-201ENST00000612102 1779 ntBASIC18.04■□□□□ 0.48
SGCEO43556 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms