Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CFAP99D6REC4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CFAP99D6REC4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CFAP99D6REC4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.42■□□□□ 0.86
CFAP99D6REC4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CFAP99D6REC4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CFAP99D6REC4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CFAP99D6REC4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CFAP99D6REC4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.42■□□□□ 0.86
CFAP99D6REC4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.42■□□□□ 0.86
CFAP99D6REC4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.42■□□□□ 0.86
CFAP99D6REC4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.42■□□□□ 0.86
CFAP99D6REC4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.42■□□□□ 0.86
CFAP99D6REC4 AC073111.5-205ENST00000641717 521 ntBASIC20.42■□□□□ 0.86
CFAP99D6REC4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CFAP99D6REC4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CFAP99D6REC4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.42■□□□□ 0.86
CFAP99D6REC4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CFAP99D6REC4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.42■□□□□ 0.86
CFAP99D6REC4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CFAP99D6REC4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.42■□□□□ 0.86
CFAP99D6REC4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CFAP99D6REC4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CFAP99D6REC4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
CFAP99D6REC4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CFAP99D6REC4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CFAP99D6REC4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CFAP99D6REC4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CFAP99D6REC4 CNN2P6-201ENST00000439038 900 ntBASIC20.41■□□□□ 0.86
CFAP99D6REC4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.41■□□□□ 0.86
CFAP99D6REC4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.41■□□□□ 0.86
CFAP99D6REC4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.41■□□□□ 0.86
CFAP99D6REC4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CFAP99D6REC4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CFAP99D6REC4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CFAP99D6REC4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CFAP99D6REC4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CFAP99D6REC4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CFAP99D6REC4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.41■□□□□ 0.86
CFAP99D6REC4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CFAP99D6REC4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CFAP99D6REC4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
CFAP99D6REC4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CFAP99D6REC4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CFAP99D6REC4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.41■□□□□ 0.86
CFAP99D6REC4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CFAP99D6REC4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CFAP99D6REC4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CFAP99D6REC4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CFAP99D6REC4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CFAP99D6REC4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CFAP99D6REC4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CFAP99D6REC4 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.4■□□□□ 0.86
CFAP99D6REC4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CFAP99D6REC4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CFAP99D6REC4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CFAP99D6REC4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CFAP99D6REC4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.4■□□□□ 0.86
CFAP99D6REC4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.4■□□□□ 0.86
CFAP99D6REC4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.4■□□□□ 0.86
CFAP99D6REC4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CFAP99D6REC4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.4■□□□□ 0.86
CFAP99D6REC4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CFAP99D6REC4 AC008694.1-202ENST00000636953 945 ntBASIC20.4■□□□□ 0.86
CFAP99D6REC4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CFAP99D6REC4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
CFAP99D6REC4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CFAP99D6REC4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.39■□□□□ 0.86
CFAP99D6REC4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.39■□□□□ 0.86
CFAP99D6REC4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CFAP99D6REC4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CFAP99D6REC4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CFAP99D6REC4 AC026185.1-201ENST00000445748 174 ntBASIC20.39■□□□□ 0.85
CFAP99D6REC4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.39■□□□□ 0.85
CFAP99D6REC4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CFAP99D6REC4 FAM21FP-204ENST00000608637 956 ntBASIC20.39■□□□□ 0.85
CFAP99D6REC4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CFAP99D6REC4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CFAP99D6REC4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CFAP99D6REC4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CFAP99D6REC4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CFAP99D6REC4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CFAP99D6REC4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CFAP99D6REC4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CFAP99D6REC4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
CFAP99D6REC4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CFAP99D6REC4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.38■□□□□ 0.85
CFAP99D6REC4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
CFAP99D6REC4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CFAP99D6REC4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CFAP99D6REC4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CFAP99D6REC4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CFAP99D6REC4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CFAP99D6REC4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CFAP99D6REC4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CFAP99D6REC4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CFAP99D6REC4 AC069236.1-201ENST00000604339 616 ntBASIC20.38■□□□□ 0.85
CFAP99D6REC4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.38■□□□□ 0.85
CFAP99D6REC4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CFAP99D6REC4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms