Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.29■□□□□ 0.52
TVP23AA6NH52 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.29■□□□□ 0.52
TVP23AA6NH52 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TVP23AA6NH52 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TVP23AA6NH52 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TVP23AA6NH52 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TVP23AA6NH52 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TVP23AA6NH52 AC138932.1-201ENST00000534164 6830 ntBASIC18.29■□□□□ 0.52
TVP23AA6NH52 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TVP23AA6NH52 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TVP23AA6NH52 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.28■□□□□ 0.52
TVP23AA6NH52 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TVP23AA6NH52 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.28■□□□□ 0.52
TVP23AA6NH52 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TVP23AA6NH52 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TVP23AA6NH52 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TVP23AA6NH52 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TVP23AA6NH52 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.28■□□□□ 0.52
TVP23AA6NH52 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TVP23AA6NH52 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TVP23AA6NH52 AC027612.3-201ENST00000413684 1047 ntBASIC18.28■□□□□ 0.52
TVP23AA6NH52 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.28■□□□□ 0.52
TVP23AA6NH52 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.28■□□□□ 0.52
TVP23AA6NH52 RARRES2P11-201ENST00000635158 484 ntBASIC18.28■□□□□ 0.52
TVP23AA6NH52 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TVP23AA6NH52 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.28■□□□□ 0.52
TVP23AA6NH52 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.28■□□□□ 0.52
TVP23AA6NH52 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TVP23AA6NH52 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TVP23AA6NH52 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TVP23AA6NH52 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.28■□□□□ 0.52
TVP23AA6NH52 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
TVP23AA6NH52 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.28■□□□□ 0.52
TVP23AA6NH52 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TVP23AA6NH52 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TVP23AA6NH52 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.28■□□□□ 0.52
TVP23AA6NH52 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TVP23AA6NH52 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TVP23AA6NH52 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TVP23AA6NH52 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
TVP23AA6NH52 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.27■□□□□ 0.52
TVP23AA6NH52 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TVP23AA6NH52 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TVP23AA6NH52 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.27■□□□□ 0.52
TVP23AA6NH52 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.27■□□□□ 0.52
TVP23AA6NH52 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TVP23AA6NH52 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.27■□□□□ 0.52
TVP23AA6NH52 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.27■□□□□ 0.52
TVP23AA6NH52 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TVP23AA6NH52 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.27■□□□□ 0.51
TVP23AA6NH52 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TVP23AA6NH52 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TVP23AA6NH52 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TVP23AA6NH52 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TVP23AA6NH52 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TVP23AA6NH52 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TVP23AA6NH52 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TVP23AA6NH52 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TVP23AA6NH52 MIR638-201ENST00000385237 100 ntBASIC18.26■□□□□ 0.51
TVP23AA6NH52 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TVP23AA6NH52 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TVP23AA6NH52 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.26■□□□□ 0.51
TVP23AA6NH52 LINC02228-203ENST00000641970 1355 ntBASIC18.26■□□□□ 0.51
TVP23AA6NH52 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TVP23AA6NH52 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TVP23AA6NH52 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TVP23AA6NH52 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.25■□□□□ 0.51
TVP23AA6NH52 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TVP23AA6NH52 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TVP23AA6NH52 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.25■□□□□ 0.51
TVP23AA6NH52 AL512408.1-201ENST00000569378 2000 ntBASIC18.25■□□□□ 0.51
TVP23AA6NH52 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TVP23AA6NH52 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.25■□□□□ 0.51
TVP23AA6NH52 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TVP23AA6NH52 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.25■□□□□ 0.51
TVP23AA6NH52 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.25■□□□□ 0.51
TVP23AA6NH52 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TVP23AA6NH52 AC245052.3-201ENST00000450182 901 ntBASIC18.25■□□□□ 0.51
TVP23AA6NH52 AC010141.2-201ENST00000452426 721 ntBASIC18.25■□□□□ 0.51
TVP23AA6NH52 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.25■□□□□ 0.51
TVP23AA6NH52 AC104187.1-201ENST00000607510 612 ntBASIC18.25■□□□□ 0.51
TVP23AA6NH52 AC112907.3-201ENST00000577781 2400 ntBASIC18.25■□□□□ 0.51
TVP23AA6NH52 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TVP23AA6NH52 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TVP23AA6NH52 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
TVP23AA6NH52 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TVP23AA6NH52 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
TVP23AA6NH52 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.25■□□□□ 0.51
TVP23AA6NH52 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.25■□□□□ 0.51
TVP23AA6NH52 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TVP23AA6NH52 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.25■□□□□ 0.51
TVP23AA6NH52 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TVP23AA6NH52 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TVP23AA6NH52 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.25■□□□□ 0.51
TVP23AA6NH52 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TVP23AA6NH52 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TVP23AA6NH52 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.24■□□□□ 0.51
TVP23AA6NH52 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TVP23AA6NH52 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TVP23AA6NH52 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms