Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV9S1A1TA0A576 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV9S1A1TA0A576 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV9S1A1TA0A576 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV9S1A1TA0A576 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV9S1A1TA0A576 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV9S1A1TA0A576 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.66■□□□□ 0.9
TCRBV9S1A1TA0A576 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.66■□□□□ 0.9
TCRBV9S1A1TA0A576 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
TCRBV9S1A1TA0A576 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
TCRBV9S1A1TA0A576 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TCRBV9S1A1TA0A576 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV9S1A1TA0A576 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TCRBV9S1A1TA0A576 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV9S1A1TA0A576 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV9S1A1TA0A576 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.65■□□□□ 0.9
TCRBV9S1A1TA0A576 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV9S1A1TA0A576 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
TCRBV9S1A1TA0A576 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV9S1A1TA0A576 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TCRBV9S1A1TA0A576 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV9S1A1TA0A576 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV9S1A1TA0A576 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TCRBV9S1A1TA0A576 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV9S1A1TA0A576 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.65■□□□□ 0.9
TCRBV9S1A1TA0A576 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.65■□□□□ 0.9
TCRBV9S1A1TA0A576 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV9S1A1TA0A576 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV9S1A1TA0A576 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV9S1A1TA0A576 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV9S1A1TA0A576 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.65■□□□□ 0.9
TCRBV9S1A1TA0A576 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.64■□□□□ 0.9
TCRBV9S1A1TA0A576 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.64■□□□□ 0.9
TCRBV9S1A1TA0A576 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
TCRBV9S1A1TA0A576 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TCRBV9S1A1TA0A576 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TCRBV9S1A1TA0A576 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TCRBV9S1A1TA0A576 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.64■□□□□ 0.89
TCRBV9S1A1TA0A576 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TCRBV9S1A1TA0A576 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.64■□□□□ 0.89
TCRBV9S1A1TA0A576 AC245052.3-201ENST00000450182 901 ntBASIC20.64■□□□□ 0.89
TCRBV9S1A1TA0A576 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TCRBV9S1A1TA0A576 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.64■□□□□ 0.89
TCRBV9S1A1TA0A576 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.64■□□□□ 0.89
TCRBV9S1A1TA0A576 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TCRBV9S1A1TA0A576 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.64■□□□□ 0.89
TCRBV9S1A1TA0A576 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TCRBV9S1A1TA0A576 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TCRBV9S1A1TA0A576 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TCRBV9S1A1TA0A576 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.64■□□□□ 0.89
TCRBV9S1A1TA0A576 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TCRBV9S1A1TA0A576 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.64■□□□□ 0.89
TCRBV9S1A1TA0A576 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.64■□□□□ 0.89
TCRBV9S1A1TA0A576 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
TCRBV9S1A1TA0A576 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.63■□□□□ 0.89
TCRBV9S1A1TA0A576 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TCRBV9S1A1TA0A576 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TCRBV9S1A1TA0A576 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.63■□□□□ 0.89
TCRBV9S1A1TA0A576 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TCRBV9S1A1TA0A576 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.63■□□□□ 0.89
TCRBV9S1A1TA0A576 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.63■□□□□ 0.89
TCRBV9S1A1TA0A576 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.63■□□□□ 0.89
TCRBV9S1A1TA0A576 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TCRBV9S1A1TA0A576 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TCRBV9S1A1TA0A576 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TCRBV9S1A1TA0A576 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TCRBV9S1A1TA0A576 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TCRBV9S1A1TA0A576 TCF3P1-201ENST00000423021 1937 ntBASIC20.63■□□□□ 0.89
TCRBV9S1A1TA0A576 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
TCRBV9S1A1TA0A576 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
TCRBV9S1A1TA0A576 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TCRBV9S1A1TA0A576 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TCRBV9S1A1TA0A576 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.62■□□□□ 0.89
TCRBV9S1A1TA0A576 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.62■□□□□ 0.89
TCRBV9S1A1TA0A576 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.62■□□□□ 0.89
TCRBV9S1A1TA0A576 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TCRBV9S1A1TA0A576 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TCRBV9S1A1TA0A576 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.62■□□□□ 0.89
TCRBV9S1A1TA0A576 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TCRBV9S1A1TA0A576 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TCRBV9S1A1TA0A576 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.62■□□□□ 0.89
TCRBV9S1A1TA0A576 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.62■□□□□ 0.89
TCRBV9S1A1TA0A576 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TCRBV9S1A1TA0A576 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TCRBV9S1A1TA0A576 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.61■□□□□ 0.89
TCRBV9S1A1TA0A576 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TCRBV9S1A1TA0A576 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.61■□□□□ 0.89
TCRBV9S1A1TA0A576 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TCRBV9S1A1TA0A576 AC010141.2-201ENST00000452426 721 ntBASIC20.61■□□□□ 0.89
TCRBV9S1A1TA0A576 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TCRBV9S1A1TA0A576 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
TCRBV9S1A1TA0A576 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TCRBV9S1A1TA0A576 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TCRBV9S1A1TA0A576 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TCRBV9S1A1TA0A576 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TCRBV9S1A1TA0A576 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TCRBV9S1A1TA0A576 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TCRBV9S1A1TA0A576 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TCRBV9S1A1TA0A576 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TCRBV9S1A1TA0A576 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms