Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC22.11■■□□□ 1.13
SMIM28A0A1B0GU29 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC22.11■■□□□ 1.13
SMIM28A0A1B0GU29 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC22.11■■□□□ 1.13
SMIM28A0A1B0GU29 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
SMIM28A0A1B0GU29 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMIM28A0A1B0GU29 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SMIM28A0A1B0GU29 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SMIM28A0A1B0GU29 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.1■■□□□ 1.13
SMIM28A0A1B0GU29 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SMIM28A0A1B0GU29 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SMIM28A0A1B0GU29 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.1■■□□□ 1.13
SMIM28A0A1B0GU29 GAS7-202ENST00000396115 929 ntTSL 5 BASIC22.1■■□□□ 1.13
SMIM28A0A1B0GU29 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC22.1■■□□□ 1.13
SMIM28A0A1B0GU29 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC22.1■■□□□ 1.13
SMIM28A0A1B0GU29 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC22.1■■□□□ 1.13
SMIM28A0A1B0GU29 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SMIM28A0A1B0GU29 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
SMIM28A0A1B0GU29 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.1■■□□□ 1.13
SMIM28A0A1B0GU29 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SMIM28A0A1B0GU29 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.1■■□□□ 1.13
SMIM28A0A1B0GU29 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SMIM28A0A1B0GU29 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMIM28A0A1B0GU29 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SMIM28A0A1B0GU29 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.09■■□□□ 1.13
SMIM28A0A1B0GU29 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMIM28A0A1B0GU29 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMIM28A0A1B0GU29 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMIM28A0A1B0GU29 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SMIM28A0A1B0GU29 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SMIM28A0A1B0GU29 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC22.09■■□□□ 1.13
SMIM28A0A1B0GU29 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC22.09■■□□□ 1.13
SMIM28A0A1B0GU29 HES2-205ENST00000487437 968 ntTSL 3 BASIC22.09■■□□□ 1.13
SMIM28A0A1B0GU29 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SMIM28A0A1B0GU29 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.09■■□□□ 1.13
SMIM28A0A1B0GU29 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.09■■□□□ 1.13
SMIM28A0A1B0GU29 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SMIM28A0A1B0GU29 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SMIM28A0A1B0GU29 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
SMIM28A0A1B0GU29 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
SMIM28A0A1B0GU29 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SMIM28A0A1B0GU29 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SMIM28A0A1B0GU29 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SMIM28A0A1B0GU29 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.08■■□□□ 1.13
SMIM28A0A1B0GU29 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
SMIM28A0A1B0GU29 PGM5P4-201ENST00000421970 445 ntBASIC22.08■■□□□ 1.13
SMIM28A0A1B0GU29 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SMIM28A0A1B0GU29 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC22.08■■□□□ 1.13
SMIM28A0A1B0GU29 UNC93B5-201ENST00000530315 699 ntBASIC22.08■■□□□ 1.13
SMIM28A0A1B0GU29 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC22.08■■□□□ 1.13
SMIM28A0A1B0GU29 AL356652.1-201ENST00000615962 565 ntBASIC22.08■■□□□ 1.13
SMIM28A0A1B0GU29 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.08■■□□□ 1.13
SMIM28A0A1B0GU29 HLA-B-256ENST00000639848 1089 ntBASIC22.08■■□□□ 1.13
SMIM28A0A1B0GU29 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SMIM28A0A1B0GU29 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SMIM28A0A1B0GU29 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SMIM28A0A1B0GU29 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMIM28A0A1B0GU29 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SMIM28A0A1B0GU29 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMIM28A0A1B0GU29 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.07■■□□□ 1.12
SMIM28A0A1B0GU29 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SMIM28A0A1B0GU29 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SMIM28A0A1B0GU29 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
SMIM28A0A1B0GU29 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMIM28A0A1B0GU29 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMIM28A0A1B0GU29 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.07■■□□□ 1.12
SMIM28A0A1B0GU29 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
SMIM28A0A1B0GU29 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC22.07■■□□□ 1.12
SMIM28A0A1B0GU29 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SMIM28A0A1B0GU29 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC22.07■■□□□ 1.12
SMIM28A0A1B0GU29 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
SMIM28A0A1B0GU29 C2orf69P4-201ENST00000565394 541 ntBASIC22.07■■□□□ 1.12
SMIM28A0A1B0GU29 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC22.07■■□□□ 1.12
SMIM28A0A1B0GU29 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SMIM28A0A1B0GU29 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.07■■□□□ 1.12
SMIM28A0A1B0GU29 AF106564.1-201ENST00000607058 2553 ntBASIC22.07■■□□□ 1.12
SMIM28A0A1B0GU29 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMIM28A0A1B0GU29 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMIM28A0A1B0GU29 AC027702.1-201ENST00000563810 1770 ntBASIC22.07■■□□□ 1.12
SMIM28A0A1B0GU29 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMIM28A0A1B0GU29 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.07■■□□□ 1.12
SMIM28A0A1B0GU29 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMIM28A0A1B0GU29 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMIM28A0A1B0GU29 AC121338.2-201ENST00000622535 1744 ntBASIC22.06■■□□□ 1.12
SMIM28A0A1B0GU29 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SMIM28A0A1B0GU29 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMIM28A0A1B0GU29 ESRRAP1-201ENST00000400596 1257 ntBASIC22.06■■□□□ 1.12
SMIM28A0A1B0GU29 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC22.06■■□□□ 1.12
SMIM28A0A1B0GU29 AC060766.5-201ENST00000590539 871 ntBASIC22.06■■□□□ 1.12
SMIM28A0A1B0GU29 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.06■■□□□ 1.12
SMIM28A0A1B0GU29 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SMIM28A0A1B0GU29 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.06■■□□□ 1.12
SMIM28A0A1B0GU29 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SMIM28A0A1B0GU29 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SMIM28A0A1B0GU29 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.06■■□□□ 1.12
SMIM28A0A1B0GU29 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SMIM28A0A1B0GU29 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
SMIM28A0A1B0GU29 ADM-205ENST00000528544 586 ntTSL 2 BASIC22.05■■□□□ 1.12
SMIM28A0A1B0GU29 MMAB-206ENST00000540016 945 ntTSL 3 BASIC22.05■■□□□ 1.12
SMIM28A0A1B0GU29 AC026310.3-201ENST00000625186 2373 ntBASIC22.05■■□□□ 1.12
SMIM28A0A1B0GU29 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms