Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV25-1A0A075B6N4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV25-1A0A075B6N4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TRBV25-1A0A075B6N4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV25-1A0A075B6N4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV25-1A0A075B6N4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
TRBV25-1A0A075B6N4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TRBV25-1A0A075B6N4 AL136116.3-201ENST00000402907 1138 ntBASIC14.75□□□□□ -0.05
TRBV25-1A0A075B6N4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC14.75□□□□□ -0.05
TRBV25-1A0A075B6N4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV25-1A0A075B6N4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC14.75□□□□□ -0.05
TRBV25-1A0A075B6N4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC14.75□□□□□ -0.05
TRBV25-1A0A075B6N4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV25-1A0A075B6N4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV25-1A0A075B6N4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV25-1A0A075B6N4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC14.75□□□□□ -0.05
TRBV25-1A0A075B6N4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV25-1A0A075B6N4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV25-1A0A075B6N4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV25-1A0A075B6N4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC14.75□□□□□ -0.05
TRBV25-1A0A075B6N4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV25-1A0A075B6N4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV25-1A0A075B6N4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV25-1A0A075B6N4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV25-1A0A075B6N4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 AC003102.1-202ENST00000563394 1796 ntBASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRBV25-1A0A075B6N4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
TRBV25-1A0A075B6N4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC14.73□□□□□ -0.05
TRBV25-1A0A075B6N4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV25-1A0A075B6N4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
TRBV25-1A0A075B6N4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV25-1A0A075B6N4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV25-1A0A075B6N4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV25-1A0A075B6N4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC14.73□□□□□ -0.05
TRBV25-1A0A075B6N4 AP006587.3-201ENST00000525742 1516 ntBASIC14.73□□□□□ -0.05
TRBV25-1A0A075B6N4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC14.73□□□□□ -0.05
TRBV25-1A0A075B6N4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV25-1A0A075B6N4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
TRBV25-1A0A075B6N4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV25-1A0A075B6N4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC14.73□□□□□ -0.05
TRBV25-1A0A075B6N4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC14.73□□□□□ -0.05
TRBV25-1A0A075B6N4 BX842568.3-201ENST00000418104 571 ntBASIC14.73□□□□□ -0.05
TRBV25-1A0A075B6N4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC14.73□□□□□ -0.05
TRBV25-1A0A075B6N4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC14.73□□□□□ -0.05
TRBV25-1A0A075B6N4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV25-1A0A075B6N4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC14.73□□□□□ -0.05
TRBV25-1A0A075B6N4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC14.73□□□□□ -0.05
TRBV25-1A0A075B6N4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV25-1A0A075B6N4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV25-1A0A075B6N4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
TRBV25-1A0A075B6N4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV25-1A0A075B6N4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV25-1A0A075B6N4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRBV25-1A0A075B6N4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC14.73□□□□□ -0.05
TRBV25-1A0A075B6N4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
TRBV25-1A0A075B6N4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.73□□□□□ -0.05
TRBV25-1A0A075B6N4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC14.73□□□□□ -0.05
TRBV25-1A0A075B6N4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.72□□□□□ -0.05
TRBV25-1A0A075B6N4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.72□□□□□ -0.05
TRBV25-1A0A075B6N4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV25-1A0A075B6N4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV25-1A0A075B6N4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV25-1A0A075B6N4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC14.72□□□□□ -0.05
TRBV25-1A0A075B6N4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRBV25-1A0A075B6N4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms