Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav6-5A0A075B6B5 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-5A0A075B6B5 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-5A0A075B6B5 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-5A0A075B6B5 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-5A0A075B6B5 Cap2-205ENSMUST00000225824 1634 ntBASIC13.87□□□□□ -0.19
Trav6-5A0A075B6B5 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-5A0A075B6B5 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav6-5A0A075B6B5 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-5A0A075B6B5 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-5A0A075B6B5 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Trav6-5A0A075B6B5 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC13.87□□□□□ -0.19
Trav6-5A0A075B6B5 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC13.87□□□□□ -0.19
Trav6-5A0A075B6B5 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-5A0A075B6B5 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-5A0A075B6B5 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-5A0A075B6B5 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-5A0A075B6B5 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-5A0A075B6B5 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-5A0A075B6B5 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trav6-5A0A075B6B5 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-5A0A075B6B5 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-5A0A075B6B5 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-5A0A075B6B5 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
Trav6-5A0A075B6B5 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trav6-5A0A075B6B5 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trav6-5A0A075B6B5 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav6-5A0A075B6B5 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-5A0A075B6B5 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-5A0A075B6B5 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav6-5A0A075B6B5 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-5A0A075B6B5 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-5A0A075B6B5 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-5A0A075B6B5 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC13.86□□□□□ -0.19
Trav6-5A0A075B6B5 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav6-5A0A075B6B5 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-5A0A075B6B5 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC13.86□□□□□ -0.19
Trav6-5A0A075B6B5 Spcs1-204ENSMUST00000226782 949 ntBASIC13.86□□□□□ -0.19
Trav6-5A0A075B6B5 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-5A0A075B6B5 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-5A0A075B6B5 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-5A0A075B6B5 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-5A0A075B6B5 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trav6-5A0A075B6B5 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-5A0A075B6B5 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav6-5A0A075B6B5 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-5A0A075B6B5 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav6-5A0A075B6B5 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-5A0A075B6B5 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-5A0A075B6B5 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav6-5A0A075B6B5 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-5A0A075B6B5 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6-5A0A075B6B5 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav6-5A0A075B6B5 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-5A0A075B6B5 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-5A0A075B6B5 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-5A0A075B6B5 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav6-5A0A075B6B5 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav6-5A0A075B6B5 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-5A0A075B6B5 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-5A0A075B6B5 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-5A0A075B6B5 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-5A0A075B6B5 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-5A0A075B6B5 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC13.85□□□□□ -0.19
Trav6-5A0A075B6B5 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-5A0A075B6B5 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Trav6-5A0A075B6B5 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav6-5A0A075B6B5 Gm5576-201ENSMUST00000075809 1236 ntBASIC13.85□□□□□ -0.19
Trav6-5A0A075B6B5 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-5A0A075B6B5 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-5A0A075B6B5 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav6-5A0A075B6B5 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-5A0A075B6B5 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-5A0A075B6B5 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Trav6-5A0A075B6B5 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-5A0A075B6B5 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-5A0A075B6B5 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-5A0A075B6B5 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav6-5A0A075B6B5 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-5A0A075B6B5 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-5A0A075B6B5 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-5A0A075B6B5 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.84□□□□□ -0.19
Trav6-5A0A075B6B5 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-5A0A075B6B5 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.84□□□□□ -0.19
Trav6-5A0A075B6B5 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-5A0A075B6B5 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-5A0A075B6B5 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.84□□□□□ -0.19
Trav6-5A0A075B6B5 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC13.84□□□□□ -0.19
Trav6-5A0A075B6B5 Gm27801-201ENSMUST00000184174 223 ntBASIC13.84□□□□□ -0.19
Trav6-5A0A075B6B5 Gm7160-202ENSMUST00000188519 1027 ntBASIC13.84□□□□□ -0.19
Trav6-5A0A075B6B5 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-5A0A075B6B5 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-5A0A075B6B5 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-5A0A075B6B5 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-5A0A075B6B5 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trav6-5A0A075B6B5 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.84□□□□□ -0.19
Trav6-5A0A075B6B5 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-5A0A075B6B5 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-5A0A075B6B5 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav6-5A0A075B6B5 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms