Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 HADHAP1-201ENST00000514498 2284 ntBASIC8.52□□□□□ -1.04
NPIPA3F8WFD2 HMGCLL1-205ENST00000398661 2532 ntTSL 2 BASIC8.52□□□□□ -1.04
NPIPA3F8WFD2 SLC8A1-205ENST00000405901 3139 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 NLGN4X-208ENST00000538097 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 ZNF333-201ENST00000292530 4672 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 AP003027.1-202ENST00000366160 2076 ntBASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 LRTOMT-201ENST00000289488 2332 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 SUN1-210ENST00000425407 3868 ntAPPRIS P3 TSL 5 BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 SGK1-211ENST00000475719 1383 ntTSL 2 BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 GPR50-201ENST00000218316 1951 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 LEO1-202ENST00000315141 1981 ntTSL 2 BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 NCAM1-213ENST00000531044 2826 ntTSL 5 BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 AP002991.2-201ENST00000623807 2801 ntBASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 AP005264.8-201ENST00000623093 3313 ntBASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 AC020661.5-201ENST00000624853 1854 ntBASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 LILRA2-201ENST00000251376 4429 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 MYL10-201ENST00000223167 1009 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 TMEM59-203ENST00000371341 1116 ntTSL 2 BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 MT1X-201ENST00000394485 450 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 HP-204ENST00000398131 1252 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 RN7SKP3-201ENST00000411409 358 ntBASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 ACTG1P1-201ENST00000415794 1129 ntBASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 AMMECR1-IT1-201ENST00000418848 561 ntTSL 5 BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 UGT1A13P-201ENST00000424780 762 ntBASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 ARL17B-201ENST00000434041 798 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 AP002381.1-201ENST00000439829 615 ntBASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 HNRNPA1P39-201ENST00000440547 960 ntBASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 ARL17A-203ENST00000445552 798 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 AL445183.1-201ENST00000447867 467 ntTSL 2 BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 RN7SL482P-201ENST00000487928 298 ntBASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 AC096759.2-202ENST00000515230 777 ntTSL 3 BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 AP001999.3-201ENST00000529922 455 ntTSL 2 BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 AC073612.1-201ENST00000548802 771 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 AC027277.2-201ENST00000566325 435 ntTSL 3 BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 AC113189.3-201ENST00000576615 330 ntTSL 3 BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 AC018521.3-201ENST00000581213 816 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 AP005202.3-201ENST00000582033 567 ntTSL 4 BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 RN7SL731P-201ENST00000584329 293 ntBASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 PSG10P-202ENST00000597171 1283 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 ZNF85-208ENST00000597314 563 ntTSL 4 BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 U3.50-201ENST00000611947 228 ntBASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 uc_338.23-201ENST00000614169 164 ntBASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 STRADA-224ENST00000617949 705 ntTSL 2 BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 FTX_5.1-201ENST00000618701 218 ntBASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 BLACAT1-201ENST00000626538 2994 ntBASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 AC007529.2-201ENST00000637435 1094 ntTSL 5 BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 COL6A3-204ENST00000392003 3464 ntTSL 2 BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 AL133492.1-201ENST00000617854 3955 ntBASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 ERICH6-203ENST00000491361 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 BLOC1S2-203ENST00000441611 2024 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 CSF2RA-205ENST00000381524 2291 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 NELL2-212ENST00000549027 3036 ntTSL 5 BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 EIF5B-201ENST00000289371 5777 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 TTC39A-201ENST00000262675 2173 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 TCF4-211ENST00000561992 2184 ntTSL 2 BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 SLC4A4-205ENST00000512686 2316 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 CCDC65-201ENST00000266984 2084 ntTSL 5 BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 AKR1C3-201ENST00000380554 1807 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 ZFY-204ENST00000449237 3464 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 C11orf45-201ENST00000310799 3624 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 MSH2-202ENST00000406134 3628 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 AC063949.2-201ENST00000508671 1968 ntTSL 2 BASIC8.52□□□□□ -1.05
NPIPA3F8WFD2 AC007238.1-201ENST00000434096 1741 ntBASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 DDX11-229ENST00000545668 3751 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 ATL1-201ENST00000358385 2647 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 SLC12A8-201ENST00000393469 3447 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 ZSCAN30-201ENST00000333206 4097 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 AC079466.1-201ENST00000587961 4453 ntTSL 2 BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 HIST1H3E-202ENST00000634733 2679 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 PLSCR4-210ENST00000493382 1375 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 FCGR2A-201ENST00000271450 2412 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 KARS-202ENST00000319410 2421 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 ELP3-201ENST00000256398 3452 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 PARP8-219ENST00000514067 2829 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 MRPS11-201ENST00000325844 3644 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 UBR4-201ENST00000375218 4031 ntTSL 2 BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 SLAMF8-201ENST00000289707 2996 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 CYP2B7P-203ENST00000599198 2956 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 RBM17-205ENST00000446108 3751 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 AKNAD1-201ENST00000369994 2318 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 ZNF449-202ENST00000370761 2051 ntTSL 2 BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 PKMP2-201ENST00000412159 1677 ntBASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 ARMCX5-206ENST00000604957 4640 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 AL109615.1-201ENST00000331979 455 ntBASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 FAM104B-201ENST00000332132 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 NPIPA5-201ENST00000360151 1088 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 SNORA42.2-201ENST00000384771 134 ntBASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 IGLV3-25-201ENST00000390305 380 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 MAPRE3-202ENST00000402218 1001 ntTSL 5 BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 TTLL11-IT1-201ENST00000411790 1052 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 AC092580.2-201ENST00000414654 469 ntTSL 2 BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 NPM1P12-201ENST00000423757 834 ntBASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 AL365273.1-201ENST00000433113 587 ntTSL 2 BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 AC005154.1-201ENST00000434399 1217 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 AC011228.1-201ENST00000439027 757 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 LINC01006-205ENST00000440711 336 ntTSL 2 BASIC8.51□□□□□ -1.05
NPIPA3F8WFD2 AL365356.2-201ENST00000441526 196 ntBASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 195.4 ms