Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AL596275.1-201ENST00000423464 877 ntBASIC19.23■□□□□ 0.67
PCDHGA9Q9Y5G4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDHGA9Q9Y5G4 AC245052.3-201ENST00000450182 901 ntBASIC19.23■□□□□ 0.67
PCDHGA9Q9Y5G4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHGA9Q9Y5G4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.23■□□□□ 0.67
PCDHGA9Q9Y5G4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDHGA9Q9Y5G4 CYP2T3P-201ENST00000601990 817 ntBASIC19.23■□□□□ 0.67
PCDHGA9Q9Y5G4 HLA-B-256ENST00000639848 1089 ntBASIC19.23■□□□□ 0.67
PCDHGA9Q9Y5G4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA9Q9Y5G4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA9Q9Y5G4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHGA9Q9Y5G4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA9Q9Y5G4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PCDHGA9Q9Y5G4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA9Q9Y5G4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA9Q9Y5G4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA9Q9Y5G4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA9Q9Y5G4 AC003102.1-202ENST00000563394 1796 ntBASIC19.22■□□□□ 0.67
PCDHGA9Q9Y5G4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.22■□□□□ 0.67
PCDHGA9Q9Y5G4 KRT17P1-201ENST00000399211 1546 ntBASIC19.22■□□□□ 0.67
PCDHGA9Q9Y5G4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
PCDHGA9Q9Y5G4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
PCDHGA9Q9Y5G4 UBE2SP1-201ENST00000450587 669 ntBASIC19.22■□□□□ 0.67
PCDHGA9Q9Y5G4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA9Q9Y5G4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA9Q9Y5G4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHGA9Q9Y5G4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHGA9Q9Y5G4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHGA9Q9Y5G4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA9Q9Y5G4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGA9Q9Y5G4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA9Q9Y5G4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PCDHGA9Q9Y5G4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA9Q9Y5G4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA9Q9Y5G4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA9Q9Y5G4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
PCDHGA9Q9Y5G4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHGA9Q9Y5G4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PCDHGA9Q9Y5G4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.21■□□□□ 0.67
PCDHGA9Q9Y5G4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PCDHGA9Q9Y5G4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA9Q9Y5G4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA9Q9Y5G4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.21■□□□□ 0.67
PCDHGA9Q9Y5G4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHGA9Q9Y5G4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA9Q9Y5G4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PCDHGA9Q9Y5G4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA9Q9Y5G4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA9Q9Y5G4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHGA9Q9Y5G4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA9Q9Y5G4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGA9Q9Y5G4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA9Q9Y5G4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHGA9Q9Y5G4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
PCDHGA9Q9Y5G4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA9Q9Y5G4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHGA9Q9Y5G4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA9Q9Y5G4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA9Q9Y5G4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHGA9Q9Y5G4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHGA9Q9Y5G4 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHGA9Q9Y5G4 AL589743.5-201ENST00000616611 1050 ntBASIC19.2■□□□□ 0.66
PCDHGA9Q9Y5G4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
PCDHGA9Q9Y5G4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA9Q9Y5G4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA9Q9Y5G4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGA9Q9Y5G4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHGA9Q9Y5G4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA9Q9Y5G4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA9Q9Y5G4 MCRIP2P1-201ENST00000394346 511 ntBASIC19.19■□□□□ 0.66
PCDHGA9Q9Y5G4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.19■□□□□ 0.66
PCDHGA9Q9Y5G4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.19■□□□□ 0.66
PCDHGA9Q9Y5G4 AC008550.1-201ENST00000511500 884 ntBASIC19.19■□□□□ 0.66
PCDHGA9Q9Y5G4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA9Q9Y5G4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA9Q9Y5G4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA9Q9Y5G4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA9Q9Y5G4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHGA9Q9Y5G4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA9Q9Y5G4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHGA9Q9Y5G4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA9Q9Y5G4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA9Q9Y5G4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGA9Q9Y5G4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA9Q9Y5G4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.18■□□□□ 0.66
PCDHGA9Q9Y5G4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHGA9Q9Y5G4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PCDHGA9Q9Y5G4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA9Q9Y5G4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA9Q9Y5G4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA9Q9Y5G4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA9Q9Y5G4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
PCDHGA9Q9Y5G4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHGA9Q9Y5G4 AL355472.2-201ENST00000422958 438 ntBASIC19.18■□□□□ 0.66
PCDHGA9Q9Y5G4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGA9Q9Y5G4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHGA9Q9Y5G4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.18■□□□□ 0.66
PCDHGA9Q9Y5G4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHGA9Q9Y5G4 AC008403.3-201ENST00000598924 454 ntBASIC19.18■□□□□ 0.66
PCDHGA9Q9Y5G4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms