Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A13Q9NSD5 POU5F1P4-201ENST00000413175 1085 ntBASIC19.4■□□□□ 0.7
SLC6A13Q9NSD5 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC6A13Q9NSD5 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.4■□□□□ 0.7
SLC6A13Q9NSD5 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A13Q9NSD5 AC007952.6-201ENST00000573168 2673 ntBASIC19.4■□□□□ 0.7
SLC6A13Q9NSD5 AC003957.1-201ENST00000625108 2673 ntBASIC19.4■□□□□ 0.7
SLC6A13Q9NSD5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC6A13Q9NSD5 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A13Q9NSD5 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SLC6A13Q9NSD5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A13Q9NSD5 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC6A13Q9NSD5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
SLC6A13Q9NSD5 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.39■□□□□ 0.7
SLC6A13Q9NSD5 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SLC6A13Q9NSD5 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A13Q9NSD5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A13Q9NSD5 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A13Q9NSD5 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SLC6A13Q9NSD5 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.39■□□□□ 0.69
SLC6A13Q9NSD5 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A13Q9NSD5 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A13Q9NSD5 AC138907.5-202ENST00000569484 235 ntBASIC19.39■□□□□ 0.69
SLC6A13Q9NSD5 AC008175.2-201ENST00000612840 297 ntBASIC19.39■□□□□ 0.69
SLC6A13Q9NSD5 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC6A13Q9NSD5 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SLC6A13Q9NSD5 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
SLC6A13Q9NSD5 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC6A13Q9NSD5 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
SLC6A13Q9NSD5 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A13Q9NSD5 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
SLC6A13Q9NSD5 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A13Q9NSD5 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A13Q9NSD5 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A13Q9NSD5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SLC6A13Q9NSD5 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A13Q9NSD5 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.38■□□□□ 0.69
SLC6A13Q9NSD5 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC6A13Q9NSD5 AC142381.2-201ENST00000566120 298 ntBASIC19.38■□□□□ 0.69
SLC6A13Q9NSD5 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A13Q9NSD5 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A13Q9NSD5 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC6A13Q9NSD5 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A13Q9NSD5 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A13Q9NSD5 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC6A13Q9NSD5 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC6A13Q9NSD5 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC6A13Q9NSD5 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A13Q9NSD5 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SLC6A13Q9NSD5 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SLC6A13Q9NSD5 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC6A13Q9NSD5 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A13Q9NSD5 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A13Q9NSD5 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
SLC6A13Q9NSD5 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A13Q9NSD5 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
SLC6A13Q9NSD5 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SLC6A13Q9NSD5 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A13Q9NSD5 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A13Q9NSD5 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SLC6A13Q9NSD5 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.36■□□□□ 0.69
SLC6A13Q9NSD5 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A13Q9NSD5 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A13Q9NSD5 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC6A13Q9NSD5 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A13Q9NSD5 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A13Q9NSD5 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A13Q9NSD5 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A13Q9NSD5 IRS3P-201ENST00000223076 1006 ntBASIC19.36■□□□□ 0.69
SLC6A13Q9NSD5 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A13Q9NSD5 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SLC6A13Q9NSD5 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.36■□□□□ 0.69
SLC6A13Q9NSD5 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A13Q9NSD5 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A13Q9NSD5 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.36■□□□□ 0.69
SLC6A13Q9NSD5 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A13Q9NSD5 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SLC6A13Q9NSD5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A13Q9NSD5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
SLC6A13Q9NSD5 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A13Q9NSD5 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.36■□□□□ 0.69
SLC6A13Q9NSD5 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A13Q9NSD5 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A13Q9NSD5 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.36■□□□□ 0.69
SLC6A13Q9NSD5 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
SLC6A13Q9NSD5 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A13Q9NSD5 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A13Q9NSD5 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SLC6A13Q9NSD5 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SLC6A13Q9NSD5 KRT16P2-201ENST00000414673 1423 ntBASIC19.35■□□□□ 0.69
SLC6A13Q9NSD5 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SLC6A13Q9NSD5 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A13Q9NSD5 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC6A13Q9NSD5 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
SLC6A13Q9NSD5 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A13Q9NSD5 SLC7A5P2-201ENST00000553010 536 ntBASIC19.35■□□□□ 0.69
SLC6A13Q9NSD5 AC092720.2-201ENST00000602388 1665 ntBASIC19.35■□□□□ 0.69
SLC6A13Q9NSD5 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A13Q9NSD5 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC6A13Q9NSD5 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms