Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TIMMDC1Q9NPL8 Z98882.1-201ENST00000622160 2253 ntBASIC19.67■□□□□ 0.74
TIMMDC1Q9NPL8 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TIMMDC1Q9NPL8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TIMMDC1Q9NPL8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TIMMDC1Q9NPL8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TIMMDC1Q9NPL8 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TIMMDC1Q9NPL8 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TIMMDC1Q9NPL8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TIMMDC1Q9NPL8 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TIMMDC1Q9NPL8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TIMMDC1Q9NPL8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.66■□□□□ 0.74
TIMMDC1Q9NPL8 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.66■□□□□ 0.74
TIMMDC1Q9NPL8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TIMMDC1Q9NPL8 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TIMMDC1Q9NPL8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.66■□□□□ 0.74
TIMMDC1Q9NPL8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TIMMDC1Q9NPL8 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.66■□□□□ 0.74
TIMMDC1Q9NPL8 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.66■□□□□ 0.74
TIMMDC1Q9NPL8 RARRES2P11-201ENST00000635158 484 ntBASIC19.66■□□□□ 0.74
TIMMDC1Q9NPL8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
TIMMDC1Q9NPL8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TIMMDC1Q9NPL8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TIMMDC1Q9NPL8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TIMMDC1Q9NPL8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.66■□□□□ 0.74
TIMMDC1Q9NPL8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TIMMDC1Q9NPL8 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TIMMDC1Q9NPL8 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.66■□□□□ 0.74
TIMMDC1Q9NPL8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TIMMDC1Q9NPL8 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TIMMDC1Q9NPL8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TIMMDC1Q9NPL8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TIMMDC1Q9NPL8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TIMMDC1Q9NPL8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.65■□□□□ 0.74
TIMMDC1Q9NPL8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.65■□□□□ 0.74
TIMMDC1Q9NPL8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.65■□□□□ 0.74
TIMMDC1Q9NPL8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.65■□□□□ 0.74
TIMMDC1Q9NPL8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TIMMDC1Q9NPL8 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TIMMDC1Q9NPL8 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TIMMDC1Q9NPL8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TIMMDC1Q9NPL8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TIMMDC1Q9NPL8 BX323043.1-201ENST00000641006 1765 ntBASIC19.65■□□□□ 0.74
TIMMDC1Q9NPL8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TIMMDC1Q9NPL8 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.65■□□□□ 0.74
TIMMDC1Q9NPL8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.64■□□□□ 0.74
TIMMDC1Q9NPL8 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TIMMDC1Q9NPL8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
TIMMDC1Q9NPL8 LETM1P2-201ENST00000597330 2178 ntBASIC19.64■□□□□ 0.74
TIMMDC1Q9NPL8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.74
TIMMDC1Q9NPL8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TIMMDC1Q9NPL8 AC026471.1-201ENST00000564629 3026 ntBASIC19.64■□□□□ 0.73
TIMMDC1Q9NPL8 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TIMMDC1Q9NPL8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.64■□□□□ 0.73
TIMMDC1Q9NPL8 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TIMMDC1Q9NPL8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.64■□□□□ 0.73
TIMMDC1Q9NPL8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.64■□□□□ 0.73
TIMMDC1Q9NPL8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.64■□□□□ 0.73
TIMMDC1Q9NPL8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TIMMDC1Q9NPL8 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TIMMDC1Q9NPL8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
TIMMDC1Q9NPL8 AC055733.4-201ENST00000638462 1354 ntBASIC19.64■□□□□ 0.73
TIMMDC1Q9NPL8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.64■□□□□ 0.73
TIMMDC1Q9NPL8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TIMMDC1Q9NPL8 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TIMMDC1Q9NPL8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TIMMDC1Q9NPL8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.64■□□□□ 0.73
TIMMDC1Q9NPL8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TIMMDC1Q9NPL8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.63■□□□□ 0.73
TIMMDC1Q9NPL8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.63■□□□□ 0.73
TIMMDC1Q9NPL8 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TIMMDC1Q9NPL8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.63■□□□□ 0.73
TIMMDC1Q9NPL8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TIMMDC1Q9NPL8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TIMMDC1Q9NPL8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.63■□□□□ 0.73
TIMMDC1Q9NPL8 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TIMMDC1Q9NPL8 AC018445.3-201ENST00000624177 1945 ntBASIC19.63■□□□□ 0.73
TIMMDC1Q9NPL8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TIMMDC1Q9NPL8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TIMMDC1Q9NPL8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.63■□□□□ 0.73
TIMMDC1Q9NPL8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TIMMDC1Q9NPL8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TIMMDC1Q9NPL8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.63■□□□□ 0.73
TIMMDC1Q9NPL8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TIMMDC1Q9NPL8 AC006015.1-201ENST00000429970 570 ntBASIC19.63■□□□□ 0.73
TIMMDC1Q9NPL8 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.63■□□□□ 0.73
TIMMDC1Q9NPL8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TIMMDC1Q9NPL8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TIMMDC1Q9NPL8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TIMMDC1Q9NPL8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TIMMDC1Q9NPL8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TIMMDC1Q9NPL8 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TIMMDC1Q9NPL8 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TIMMDC1Q9NPL8 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.63■□□□□ 0.73
TIMMDC1Q9NPL8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TIMMDC1Q9NPL8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.62■□□□□ 0.73
TIMMDC1Q9NPL8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TIMMDC1Q9NPL8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TIMMDC1Q9NPL8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.62■□□□□ 0.73
TIMMDC1Q9NPL8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms