Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
CHMP4BQ9H444 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC25.92■■□□□ 1.74
CHMP4BQ9H444 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
CHMP4BQ9H444 STX7-201ENST00000367937 1090 ntTSL 5 BASIC25.92■■□□□ 1.74
CHMP4BQ9H444 GXYLT1P2-201ENST00000433312 1230 ntBASIC25.92■■□□□ 1.74
CHMP4BQ9H444 TERF1P5-201ENST00000477545 1207 ntBASIC25.92■■□□□ 1.74
CHMP4BQ9H444 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC25.92■■□□□ 1.74
CHMP4BQ9H444 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC25.92■■□□□ 1.74
CHMP4BQ9H444 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC25.92■■□□□ 1.74
CHMP4BQ9H444 AC137761.2-201ENST00000561729 223 ntBASIC25.92■■□□□ 1.74
CHMP4BQ9H444 AC145350.3-201ENST00000569033 163 ntBASIC25.92■■□□□ 1.74
CHMP4BQ9H444 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC25.92■■□□□ 1.74
CHMP4BQ9H444 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CHMP4BQ9H444 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC25.92■■□□□ 1.74
CHMP4BQ9H444 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC25.92■■□□□ 1.74
CHMP4BQ9H444 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CHMP4BQ9H444 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC25.92■■□□□ 1.74
CHMP4BQ9H444 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC25.91■■□□□ 1.74
CHMP4BQ9H444 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHMP4BQ9H444 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC25.91■■□□□ 1.74
CHMP4BQ9H444 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CHMP4BQ9H444 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC25.91■■□□□ 1.74
CHMP4BQ9H444 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHMP4BQ9H444 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHMP4BQ9H444 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHMP4BQ9H444 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHMP4BQ9H444 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHMP4BQ9H444 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHMP4BQ9H444 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC25.91■■□□□ 1.74
CHMP4BQ9H444 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
CHMP4BQ9H444 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC25.91■■□□□ 1.74
CHMP4BQ9H444 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
CHMP4BQ9H444 AC010536.3-201ENST00000620306 533 ntBASIC25.91■■□□□ 1.74
CHMP4BQ9H444 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHMP4BQ9H444 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHMP4BQ9H444 AP005212.1-201ENST00000581547 1997 ntBASIC25.91■■□□□ 1.74
CHMP4BQ9H444 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
CHMP4BQ9H444 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHMP4BQ9H444 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC25.91■■□□□ 1.74
CHMP4BQ9H444 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC25.91■■□□□ 1.74
CHMP4BQ9H444 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHMP4BQ9H444 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CHMP4BQ9H444 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHMP4BQ9H444 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHMP4BQ9H444 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CHMP4BQ9H444 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHMP4BQ9H444 HSCB-202ENST00000398941 955 ntTSL 2 BASIC25.9■■□□□ 1.74
CHMP4BQ9H444 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC25.9■■□□□ 1.74
CHMP4BQ9H444 AL162412.1-201ENST00000567129 965 ntBASIC25.9■■□□□ 1.74
CHMP4BQ9H444 MIR5787-201ENST00000611784 55 ntBASIC25.9■■□□□ 1.74
CHMP4BQ9H444 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC25.9■■□□□ 1.74
CHMP4BQ9H444 MIR2861-201ENST00000636310 90 ntBASIC25.9■■□□□ 1.74
CHMP4BQ9H444 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
CHMP4BQ9H444 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CHMP4BQ9H444 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CHMP4BQ9H444 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHMP4BQ9H444 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHMP4BQ9H444 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CHMP4BQ9H444 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CHMP4BQ9H444 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
CHMP4BQ9H444 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC25.89■■□□□ 1.74
CHMP4BQ9H444 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CHMP4BQ9H444 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC25.89■■□□□ 1.74
CHMP4BQ9H444 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC25.89■■□□□ 1.74
CHMP4BQ9H444 FAM21FP-204ENST00000608637 956 ntBASIC25.89■■□□□ 1.74
CHMP4BQ9H444 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC25.89■■□□□ 1.74
CHMP4BQ9H444 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
CHMP4BQ9H444 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.73
CHMP4BQ9H444 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC25.89■■□□□ 1.73
CHMP4BQ9H444 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
CHMP4BQ9H444 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC25.88■■□□□ 1.73
CHMP4BQ9H444 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CHMP4BQ9H444 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CHMP4BQ9H444 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CHMP4BQ9H444 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CHMP4BQ9H444 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
CHMP4BQ9H444 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CHMP4BQ9H444 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CHMP4BQ9H444 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CHMP4BQ9H444 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CHMP4BQ9H444 AC007322.4-201ENST00000509611 723 ntBASIC25.88■■□□□ 1.73
CHMP4BQ9H444 SPI1-203ENST00000533030 661 ntTSL 2 BASIC25.88■■□□□ 1.73
CHMP4BQ9H444 BRI3-207ENST00000539286 699 ntTSL 2 BASIC25.88■■□□□ 1.73
CHMP4BQ9H444 AL591742.1-201ENST00000604433 565 ntBASIC25.88■■□□□ 1.73
CHMP4BQ9H444 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CHMP4BQ9H444 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CHMP4BQ9H444 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC25.88■■□□□ 1.73
CHMP4BQ9H444 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
CHMP4BQ9H444 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC25.88■■□□□ 1.73
CHMP4BQ9H444 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CHMP4BQ9H444 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CHMP4BQ9H444 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CHMP4BQ9H444 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC25.87■■□□□ 1.73
CHMP4BQ9H444 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
CHMP4BQ9H444 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CHMP4BQ9H444 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CHMP4BQ9H444 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
CHMP4BQ9H444 AC016769.1-201ENST00000409132 1010 ntBASIC25.87■■□□□ 1.73
CHMP4BQ9H444 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC25.87■■□□□ 1.73
CHMP4BQ9H444 AC013268.1-206ENST00000638368 961 ntBASIC25.87■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms