Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC68Q9H2F9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC68Q9H2F9 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CCDC68Q9H2F9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
CCDC68Q9H2F9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.54■□□□□ 0.88
CCDC68Q9H2F9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC68Q9H2F9 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC68Q9H2F9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC68Q9H2F9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CCDC68Q9H2F9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC68Q9H2F9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC68Q9H2F9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC68Q9H2F9 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CCDC68Q9H2F9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC68Q9H2F9 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.54■□□□□ 0.88
CCDC68Q9H2F9 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC68Q9H2F9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC68Q9H2F9 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CCDC68Q9H2F9 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC68Q9H2F9 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC68Q9H2F9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CCDC68Q9H2F9 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC68Q9H2F9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC68Q9H2F9 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC68Q9H2F9 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC68Q9H2F9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC68Q9H2F9 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC68Q9H2F9 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC68Q9H2F9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC68Q9H2F9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC68Q9H2F9 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
CCDC68Q9H2F9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC68Q9H2F9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC68Q9H2F9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC68Q9H2F9 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC68Q9H2F9 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CCDC68Q9H2F9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC68Q9H2F9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC68Q9H2F9 SLC7A5P2-201ENST00000553010 536 ntBASIC20.53■□□□□ 0.88
CCDC68Q9H2F9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC68Q9H2F9 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC68Q9H2F9 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC68Q9H2F9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC68Q9H2F9 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC68Q9H2F9 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC68Q9H2F9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC68Q9H2F9 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC68Q9H2F9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC68Q9H2F9 AC011484.1-201ENST00000377652 1995 ntBASIC20.53■□□□□ 0.88
CCDC68Q9H2F9 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC68Q9H2F9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC68Q9H2F9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
CCDC68Q9H2F9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC68Q9H2F9 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC68Q9H2F9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC68Q9H2F9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC68Q9H2F9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC68Q9H2F9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CCDC68Q9H2F9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC68Q9H2F9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC68Q9H2F9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC68Q9H2F9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC68Q9H2F9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC68Q9H2F9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC68Q9H2F9 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC68Q9H2F9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC68Q9H2F9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC68Q9H2F9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC68Q9H2F9 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.52■□□□□ 0.87
CCDC68Q9H2F9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC68Q9H2F9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.87
CCDC68Q9H2F9 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
CCDC68Q9H2F9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
CCDC68Q9H2F9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC68Q9H2F9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC68Q9H2F9 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC68Q9H2F9 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC68Q9H2F9 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
CCDC68Q9H2F9 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC68Q9H2F9 AC034268.1-201ENST00000441047 882 ntBASIC20.51■□□□□ 0.87
CCDC68Q9H2F9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC68Q9H2F9 RARRES2P11-201ENST00000635158 484 ntBASIC20.51■□□□□ 0.87
CCDC68Q9H2F9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC68Q9H2F9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC68Q9H2F9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC68Q9H2F9 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC68Q9H2F9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CCDC68Q9H2F9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC68Q9H2F9 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC68Q9H2F9 AC073130.3-201ENST00000624389 2278 ntBASIC20.51■□□□□ 0.87
CCDC68Q9H2F9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CCDC68Q9H2F9 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC68Q9H2F9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC68Q9H2F9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC68Q9H2F9 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC68Q9H2F9 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC68Q9H2F9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC68Q9H2F9 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.5■□□□□ 0.87
CCDC68Q9H2F9 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC68Q9H2F9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms