Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.12
UPK3BQ9BT76 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.12
UPK3BQ9BT76 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
UPK3BQ9BT76 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
UPK3BQ9BT76 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC14.27□□□□□ -0.12
UPK3BQ9BT76 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
UPK3BQ9BT76 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
UPK3BQ9BT76 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
UPK3BQ9BT76 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC14.27□□□□□ -0.13
UPK3BQ9BT76 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
UPK3BQ9BT76 GUSBP6-202ENST00000438529 1198 ntBASIC14.27□□□□□ -0.13
UPK3BQ9BT76 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
UPK3BQ9BT76 AC105036.2-201ENST00000569468 176 ntBASIC14.27□□□□□ -0.13
UPK3BQ9BT76 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UPK3BQ9BT76 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC14.27□□□□□ -0.13
UPK3BQ9BT76 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UPK3BQ9BT76 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UPK3BQ9BT76 C11orf96-202ENST00000528572 1834 ntBASIC14.27□□□□□ -0.13
UPK3BQ9BT76 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
UPK3BQ9BT76 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
UPK3BQ9BT76 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
UPK3BQ9BT76 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK3BQ9BT76 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UPK3BQ9BT76 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK3BQ9BT76 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK3BQ9BT76 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK3BQ9BT76 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
UPK3BQ9BT76 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK3BQ9BT76 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK3BQ9BT76 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.26□□□□□ -0.13
UPK3BQ9BT76 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
UPK3BQ9BT76 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UPK3BQ9BT76 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UPK3BQ9BT76 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC14.26□□□□□ -0.13
UPK3BQ9BT76 AL355802.2-201ENST00000402069 882 ntBASIC14.26□□□□□ -0.13
UPK3BQ9BT76 CDV3P1-201ENST00000471403 739 ntBASIC14.26□□□□□ -0.13
UPK3BQ9BT76 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC14.26□□□□□ -0.13
UPK3BQ9BT76 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC14.26□□□□□ -0.13
UPK3BQ9BT76 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC14.26□□□□□ -0.13
UPK3BQ9BT76 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC14.26□□□□□ -0.13
UPK3BQ9BT76 FAM21FP-204ENST00000608637 956 ntBASIC14.26□□□□□ -0.13
UPK3BQ9BT76 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.26□□□□□ -0.13
UPK3BQ9BT76 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
UPK3BQ9BT76 TERT-206ENST00000508104 2486 ntTSL 5 BASIC14.26□□□□□ -0.13
UPK3BQ9BT76 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK3BQ9BT76 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK3BQ9BT76 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK3BQ9BT76 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK3BQ9BT76 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
UPK3BQ9BT76 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK3BQ9BT76 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UPK3BQ9BT76 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
UPK3BQ9BT76 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC14.25□□□□□ -0.13
UPK3BQ9BT76 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UPK3BQ9BT76 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK3BQ9BT76 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UPK3BQ9BT76 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
UPK3BQ9BT76 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
UPK3BQ9BT76 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
UPK3BQ9BT76 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK3BQ9BT76 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK3BQ9BT76 PALM-208ENST00000592155 2272 ntTSL 4 BASIC14.25□□□□□ -0.13
UPK3BQ9BT76 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
UPK3BQ9BT76 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK3BQ9BT76 WWC2-AS2-201ENST00000578387 2183 ntBASIC14.25□□□□□ -0.13
UPK3BQ9BT76 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK3BQ9BT76 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK3BQ9BT76 AC073210.2-201ENST00000430369 194 ntBASIC14.25□□□□□ -0.13
UPK3BQ9BT76 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK3BQ9BT76 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC14.25□□□□□ -0.13
UPK3BQ9BT76 RARRES2P4-201ENST00000514074 484 ntBASIC14.25□□□□□ -0.13
UPK3BQ9BT76 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UPK3BQ9BT76 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.25□□□□□ -0.13
UPK3BQ9BT76 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
UPK3BQ9BT76 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK3BQ9BT76 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK3BQ9BT76 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK3BQ9BT76 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK3BQ9BT76 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK3BQ9BT76 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC14.25□□□□□ -0.13
UPK3BQ9BT76 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK3BQ9BT76 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK3BQ9BT76 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK3BQ9BT76 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK3BQ9BT76 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UPK3BQ9BT76 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
UPK3BQ9BT76 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK3BQ9BT76 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC14.24□□□□□ -0.13
UPK3BQ9BT76 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK3BQ9BT76 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
UPK3BQ9BT76 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK3BQ9BT76 AC091799.1-201ENST00000422823 811 ntBASIC14.24□□□□□ -0.13
UPK3BQ9BT76 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UPK3BQ9BT76 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
UPK3BQ9BT76 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC14.24□□□□□ -0.13
UPK3BQ9BT76 GAMT-205ENST00000640762 751 ntTSL 5 BASIC14.24□□□□□ -0.13
UPK3BQ9BT76 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UPK3BQ9BT76 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK3BQ9BT76 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UPK3BQ9BT76 MKRN4P-201ENST00000444706 1521 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms