Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 DUX4L6-201ENST00000626483 1275 ntBASIC16.93■□□□□ 0.3
S1PR3Q99500 DUX4L1-201ENST00000627662 1275 ntBASIC16.93■□□□□ 0.3
S1PR3Q99500 DUX4L8-201ENST00000629013 1275 ntBASIC16.93■□□□□ 0.3
S1PR3Q99500 DUX4L3-201ENST00000630187 1275 ntBASIC16.93■□□□□ 0.3
S1PR3Q99500 DUX4L7-201ENST00000630678 1275 ntBASIC16.93■□□□□ 0.3
S1PR3Q99500 DUX4L5-201ENST00000630834 1275 ntBASIC16.93■□□□□ 0.3
S1PR3Q99500 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
S1PR3Q99500 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
S1PR3Q99500 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
S1PR3Q99500 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
S1PR3Q99500 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
S1PR3Q99500 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
S1PR3Q99500 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
S1PR3Q99500 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
S1PR3Q99500 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.93■□□□□ 0.3
S1PR3Q99500 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
S1PR3Q99500 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
S1PR3Q99500 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
S1PR3Q99500 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
S1PR3Q99500 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
S1PR3Q99500 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
S1PR3Q99500 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.92■□□□□ 0.3
S1PR3Q99500 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.92■□□□□ 0.3
S1PR3Q99500 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
S1PR3Q99500 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
S1PR3Q99500 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
S1PR3Q99500 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
S1PR3Q99500 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
S1PR3Q99500 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.92■□□□□ 0.3
S1PR3Q99500 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
S1PR3Q99500 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.92■□□□□ 0.3
S1PR3Q99500 AC245052.3-201ENST00000450182 901 ntBASIC16.92■□□□□ 0.3
S1PR3Q99500 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.92■□□□□ 0.3
S1PR3Q99500 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.92■□□□□ 0.3
S1PR3Q99500 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
S1PR3Q99500 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
S1PR3Q99500 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
S1PR3Q99500 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
S1PR3Q99500 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
S1PR3Q99500 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
S1PR3Q99500 AC073130.3-201ENST00000624389 2278 ntBASIC16.91■□□□□ 0.3
S1PR3Q99500 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
S1PR3Q99500 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
S1PR3Q99500 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
S1PR3Q99500 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
S1PR3Q99500 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
S1PR3Q99500 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
S1PR3Q99500 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.91■□□□□ 0.3
S1PR3Q99500 AC010141.2-201ENST00000452426 721 ntBASIC16.91■□□□□ 0.3
S1PR3Q99500 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.91■□□□□ 0.3
S1PR3Q99500 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.91■□□□□ 0.3
S1PR3Q99500 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.91■□□□□ 0.3
S1PR3Q99500 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
S1PR3Q99500 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
S1PR3Q99500 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.91■□□□□ 0.3
S1PR3Q99500 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
S1PR3Q99500 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
S1PR3Q99500 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.91■□□□□ 0.3
S1PR3Q99500 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
S1PR3Q99500 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
S1PR3Q99500 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
S1PR3Q99500 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
S1PR3Q99500 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
S1PR3Q99500 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
S1PR3Q99500 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
S1PR3Q99500 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.9■□□□□ 0.3
S1PR3Q99500 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
S1PR3Q99500 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.9■□□□□ 0.3
S1PR3Q99500 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.9■□□□□ 0.3
S1PR3Q99500 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
S1PR3Q99500 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
S1PR3Q99500 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.9■□□□□ 0.3
S1PR3Q99500 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.9■□□□□ 0.3
S1PR3Q99500 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
S1PR3Q99500 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
S1PR3Q99500 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.9■□□□□ 0.3
S1PR3Q99500 AC104187.1-201ENST00000607510 612 ntBASIC16.9■□□□□ 0.3
S1PR3Q99500 MIR5787-201ENST00000611784 55 ntBASIC16.9■□□□□ 0.3
S1PR3Q99500 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.9■□□□□ 0.3
S1PR3Q99500 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
S1PR3Q99500 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
S1PR3Q99500 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
S1PR3Q99500 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.9■□□□□ 0.3
S1PR3Q99500 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.9■□□□□ 0.3
S1PR3Q99500 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
S1PR3Q99500 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.9■□□□□ 0.3
S1PR3Q99500 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
S1PR3Q99500 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.89■□□□□ 0.3
S1PR3Q99500 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
S1PR3Q99500 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
S1PR3Q99500 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
S1PR3Q99500 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
S1PR3Q99500 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.89■□□□□ 0.29
S1PR3Q99500 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.89■□□□□ 0.29
S1PR3Q99500 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
S1PR3Q99500 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.89■□□□□ 0.29
S1PR3Q99500 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.89■□□□□ 0.29
S1PR3Q99500 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
S1PR3Q99500 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.89■□□□□ 0.29
S1PR3Q99500 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms