Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF2Q99496 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF2Q99496 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF2Q99496 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF2Q99496 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF2Q99496 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF2Q99496 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF2Q99496 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF2Q99496 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF2Q99496 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF2Q99496 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF2Q99496 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF2Q99496 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RNF2Q99496 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF2Q99496 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF2Q99496 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF2Q99496 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF2Q99496 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF2Q99496 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RNF2Q99496 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RNF2Q99496 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RNF2Q99496 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF2Q99496 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF2Q99496 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RNF2Q99496 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF2Q99496 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF2Q99496 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF2Q99496 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF2Q99496 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF2Q99496 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF2Q99496 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF2Q99496 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RNF2Q99496 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF2Q99496 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF2Q99496 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF2Q99496 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF2Q99496 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF2Q99496 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF2Q99496 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF2Q99496 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF2Q99496 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
RNF2Q99496 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF2Q99496 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF2Q99496 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF2Q99496 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF2Q99496 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.29■□□□□ 0.2
RNF2Q99496 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF2Q99496 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF2Q99496 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF2Q99496 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF2Q99496 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF2Q99496 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
RNF2Q99496 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RNF2Q99496 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF2Q99496 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF2Q99496 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF2Q99496 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF2Q99496 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF2Q99496 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF2Q99496 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF2Q99496 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF2Q99496 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF2Q99496 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF2Q99496 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RNF2Q99496 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF2Q99496 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
RNF2Q99496 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF2Q99496 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF2Q99496 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF2Q99496 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF2Q99496 AP006587.3-201ENST00000525742 1516 ntBASIC16.28■□□□□ 0.2
RNF2Q99496 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF2Q99496 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF2Q99496 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF2Q99496 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF2Q99496 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF2Q99496 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF2Q99496 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF2Q99496 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF2Q99496 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF2Q99496 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF2Q99496 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF2Q99496 AC121338.2-201ENST00000622535 1744 ntBASIC16.28■□□□□ 0.2
RNF2Q99496 AL158211.5-201ENST00000623583 2518 ntBASIC16.27■□□□□ 0.2
RNF2Q99496 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF2Q99496 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF2Q99496 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.27■□□□□ 0.2
RNF2Q99496 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RNF2Q99496 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RNF2Q99496 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RNF2Q99496 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RNF2Q99496 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF2Q99496 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF2Q99496 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.27■□□□□ 0.2
RNF2Q99496 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF2Q99496 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF2Q99496 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.27■□□□□ 0.2
RNF2Q99496 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF2Q99496 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.27■□□□□ 0.2
RNF2Q99496 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms