Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
NEK1Q96PY6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
NEK1Q96PY6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
NEK1Q96PY6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC24.36■■□□□ 1.49
NEK1Q96PY6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
NEK1Q96PY6 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
NEK1Q96PY6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
NEK1Q96PY6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
NEK1Q96PY6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC24.35■■□□□ 1.49
NEK1Q96PY6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
NEK1Q96PY6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
NEK1Q96PY6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
NEK1Q96PY6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
NEK1Q96PY6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC24.35■■□□□ 1.49
NEK1Q96PY6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC24.35■■□□□ 1.49
NEK1Q96PY6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
NEK1Q96PY6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
NEK1Q96PY6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
NEK1Q96PY6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
NEK1Q96PY6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
NEK1Q96PY6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
NEK1Q96PY6 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC24.34■■□□□ 1.49
NEK1Q96PY6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC24.34■■□□□ 1.49
NEK1Q96PY6 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC24.34■■□□□ 1.49
NEK1Q96PY6 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
NEK1Q96PY6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
NEK1Q96PY6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC24.34■■□□□ 1.49
NEK1Q96PY6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC24.34■■□□□ 1.49
NEK1Q96PY6 AC022517.1-201ENST00000592429 346 ntBASIC24.34■■□□□ 1.49
NEK1Q96PY6 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC24.34■■□□□ 1.49
NEK1Q96PY6 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC24.34■■□□□ 1.49
NEK1Q96PY6 AP005212.1-201ENST00000581547 1997 ntBASIC24.34■■□□□ 1.49
NEK1Q96PY6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
NEK1Q96PY6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
NEK1Q96PY6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
NEK1Q96PY6 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC24.33■■□□□ 1.49
NEK1Q96PY6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
NEK1Q96PY6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
NEK1Q96PY6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC24.33■■□□□ 1.49
NEK1Q96PY6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC24.33■■□□□ 1.49
NEK1Q96PY6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
NEK1Q96PY6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
NEK1Q96PY6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC24.33■■□□□ 1.49
NEK1Q96PY6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
NEK1Q96PY6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.33■■□□□ 1.49
NEK1Q96PY6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
NEK1Q96PY6 SAPCD2P1-201ENST00000395413 1184 ntBASIC24.33■■□□□ 1.49
NEK1Q96PY6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC24.33■■□□□ 1.49
NEK1Q96PY6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
NEK1Q96PY6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
NEK1Q96PY6 AL121603.2-201ENST00000557373 2117 ntBASIC24.33■■□□□ 1.49
NEK1Q96PY6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC24.33■■□□□ 1.49
NEK1Q96PY6 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.48
NEK1Q96PY6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.48
NEK1Q96PY6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC24.33■■□□□ 1.48
NEK1Q96PY6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC24.32■■□□□ 1.48
NEK1Q96PY6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
NEK1Q96PY6 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
NEK1Q96PY6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC24.32■■□□□ 1.48
NEK1Q96PY6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NEK1Q96PY6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
NEK1Q96PY6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC24.32■■□□□ 1.48
NEK1Q96PY6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
NEK1Q96PY6 AC092667.1-201ENST00000434301 2586 ntBASIC24.32■■□□□ 1.48
NEK1Q96PY6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
NEK1Q96PY6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NEK1Q96PY6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
NEK1Q96PY6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
NEK1Q96PY6 CDV3P1-201ENST00000471403 739 ntBASIC24.32■■□□□ 1.48
NEK1Q96PY6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC24.32■■□□□ 1.48
NEK1Q96PY6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC24.32■■□□□ 1.48
NEK1Q96PY6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC24.32■■□□□ 1.48
NEK1Q96PY6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC24.32■■□□□ 1.48
NEK1Q96PY6 AC011767.1-201ENST00000617410 1153 ntBASIC24.32■■□□□ 1.48
NEK1Q96PY6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
NEK1Q96PY6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NEK1Q96PY6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC24.32■■□□□ 1.48
NEK1Q96PY6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
NEK1Q96PY6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC24.32■■□□□ 1.48
NEK1Q96PY6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC24.32■■□□□ 1.48
NEK1Q96PY6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
NEK1Q96PY6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
NEK1Q96PY6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
NEK1Q96PY6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
NEK1Q96PY6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
NEK1Q96PY6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
NEK1Q96PY6 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
NEK1Q96PY6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
NEK1Q96PY6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
NEK1Q96PY6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC24.31■■□□□ 1.48
NEK1Q96PY6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC24.31■■□□□ 1.48
NEK1Q96PY6 DUX4L16-201ENST00000555130 1264 ntBASIC24.31■■□□□ 1.48
NEK1Q96PY6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC24.31■■□□□ 1.48
NEK1Q96PY6 MIR2861-201ENST00000636310 90 ntBASIC24.31■■□□□ 1.48
NEK1Q96PY6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
NEK1Q96PY6 LINC01521-201ENST00000504184 1943 ntBASIC24.31■■□□□ 1.48
NEK1Q96PY6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC24.31■■□□□ 1.48
NEK1Q96PY6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
NEK1Q96PY6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC24.3■■□□□ 1.48
NEK1Q96PY6 GABARAPL3-202ENST00000624044 1851 ntBASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms