Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSPG4P5Q96PW8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CSPG4P5Q96PW8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSPG4P5Q96PW8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSPG4P5Q96PW8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
CSPG4P5Q96PW8 AC073314.1-201ENST00000568729 2216 ntBASIC21.23■□□□□ 0.99
CSPG4P5Q96PW8 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CSPG4P5Q96PW8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CSPG4P5Q96PW8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSPG4P5Q96PW8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CSPG4P5Q96PW8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CSPG4P5Q96PW8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CSPG4P5Q96PW8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSPG4P5Q96PW8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.22■□□□□ 0.99
CSPG4P5Q96PW8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CSPG4P5Q96PW8 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.22■□□□□ 0.99
CSPG4P5Q96PW8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.22■□□□□ 0.99
CSPG4P5Q96PW8 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.22■□□□□ 0.99
CSPG4P5Q96PW8 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CSPG4P5Q96PW8 DUX4L16-201ENST00000555130 1264 ntBASIC21.22■□□□□ 0.99
CSPG4P5Q96PW8 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.22■□□□□ 0.99
CSPG4P5Q96PW8 AC013268.1-206ENST00000638368 961 ntBASIC21.22■□□□□ 0.99
CSPG4P5Q96PW8 AC112229.1-201ENST00000639295 961 ntBASIC21.22■□□□□ 0.99
CSPG4P5Q96PW8 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSPG4P5Q96PW8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSPG4P5Q96PW8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSPG4P5Q96PW8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.22■□□□□ 0.99
CSPG4P5Q96PW8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.21■□□□□ 0.99
CSPG4P5Q96PW8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CSPG4P5Q96PW8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
CSPG4P5Q96PW8 LINC01006-201ENST00000333319 2292 ntBASIC21.21■□□□□ 0.99
CSPG4P5Q96PW8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CSPG4P5Q96PW8 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSPG4P5Q96PW8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSPG4P5Q96PW8 AC007322.4-201ENST00000509611 723 ntBASIC21.21■□□□□ 0.99
CSPG4P5Q96PW8 AL121603.2-201ENST00000557373 2117 ntBASIC21.21■□□□□ 0.99
CSPG4P5Q96PW8 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.21■□□□□ 0.99
CSPG4P5Q96PW8 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.21■□□□□ 0.99
CSPG4P5Q96PW8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSPG4P5Q96PW8 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.21■□□□□ 0.99
CSPG4P5Q96PW8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CSPG4P5Q96PW8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CSPG4P5Q96PW8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.21■□□□□ 0.99
CSPG4P5Q96PW8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSPG4P5Q96PW8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSPG4P5Q96PW8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CSPG4P5Q96PW8 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSPG4P5Q96PW8 AP005212.1-201ENST00000581547 1997 ntBASIC21.21■□□□□ 0.99
CSPG4P5Q96PW8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CSPG4P5Q96PW8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.21■□□□□ 0.99
CSPG4P5Q96PW8 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.21■□□□□ 0.99
CSPG4P5Q96PW8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
CSPG4P5Q96PW8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSPG4P5Q96PW8 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CSPG4P5Q96PW8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSPG4P5Q96PW8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CSPG4P5Q96PW8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CSPG4P5Q96PW8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSPG4P5Q96PW8 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.2■□□□□ 0.98
CSPG4P5Q96PW8 CNN2P6-201ENST00000439038 900 ntBASIC21.2■□□□□ 0.98
CSPG4P5Q96PW8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.2■□□□□ 0.98
CSPG4P5Q96PW8 CDV3P1-201ENST00000471403 739 ntBASIC21.2■□□□□ 0.98
CSPG4P5Q96PW8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.2■□□□□ 0.98
CSPG4P5Q96PW8 AL591742.1-201ENST00000604433 565 ntBASIC21.2■□□□□ 0.98
CSPG4P5Q96PW8 BID-214ENST00000617586 542 ntTSL 5 BASIC21.2■□□□□ 0.98
CSPG4P5Q96PW8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CSPG4P5Q96PW8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CSPG4P5Q96PW8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.2■□□□□ 0.98
CSPG4P5Q96PW8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.2■□□□□ 0.98
CSPG4P5Q96PW8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CSPG4P5Q96PW8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSPG4P5Q96PW8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CSPG4P5Q96PW8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CSPG4P5Q96PW8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CSPG4P5Q96PW8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
CSPG4P5Q96PW8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSPG4P5Q96PW8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.19■□□□□ 0.98
CSPG4P5Q96PW8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CSPG4P5Q96PW8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSPG4P5Q96PW8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CSPG4P5Q96PW8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.19■□□□□ 0.98
CSPG4P5Q96PW8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CSPG4P5Q96PW8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.19■□□□□ 0.98
CSPG4P5Q96PW8 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CSPG4P5Q96PW8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CSPG4P5Q96PW8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CSPG4P5Q96PW8 AC092437.1-201ENST00000624794 1048 ntBASIC21.19■□□□□ 0.98
CSPG4P5Q96PW8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.19■□□□□ 0.98
CSPG4P5Q96PW8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSPG4P5Q96PW8 AC092667.1-201ENST00000434301 2586 ntBASIC21.19■□□□□ 0.98
CSPG4P5Q96PW8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSPG4P5Q96PW8 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.19■□□□□ 0.98
CSPG4P5Q96PW8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.19■□□□□ 0.98
CSPG4P5Q96PW8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSPG4P5Q96PW8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSPG4P5Q96PW8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
CSPG4P5Q96PW8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.18■□□□□ 0.98
CSPG4P5Q96PW8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CSPG4P5Q96PW8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CSPG4P5Q96PW8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms