Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 MMAB-206ENST00000540016 945 ntTSL 3 BASIC23.08■■□□□ 1.29
ATP6V0A1Q93050 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC23.08■■□□□ 1.29
ATP6V0A1Q93050 IRX5-204ENST00000560154 879 ntTSL 5 BASIC23.08■■□□□ 1.29
ATP6V0A1Q93050 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
ATP6V0A1Q93050 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ATP6V0A1Q93050 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
ATP6V0A1Q93050 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.08■■□□□ 1.29
ATP6V0A1Q93050 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
ATP6V0A1Q93050 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
ATP6V0A1Q93050 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC23.08■■□□□ 1.28
ATP6V0A1Q93050 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
ATP6V0A1Q93050 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ATP6V0A1Q93050 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ATP6V0A1Q93050 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.07■■□□□ 1.28
ATP6V0A1Q93050 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
ATP6V0A1Q93050 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
ATP6V0A1Q93050 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ATP6V0A1Q93050 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ATP6V0A1Q93050 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.07■■□□□ 1.28
ATP6V0A1Q93050 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ATP6V0A1Q93050 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC23.07■■□□□ 1.28
ATP6V0A1Q93050 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC23.07■■□□□ 1.28
ATP6V0A1Q93050 CYP2T3P-201ENST00000601990 817 ntBASIC23.07■■□□□ 1.28
ATP6V0A1Q93050 AC006058.3-201ENST00000606217 1069 ntBASIC23.07■■□□□ 1.28
ATP6V0A1Q93050 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
ATP6V0A1Q93050 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ATP6V0A1Q93050 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
ATP6V0A1Q93050 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.07■■□□□ 1.28
ATP6V0A1Q93050 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.07■■□□□ 1.28
ATP6V0A1Q93050 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ATP6V0A1Q93050 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATP6V0A1Q93050 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATP6V0A1Q93050 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC23.06■■□□□ 1.28
ATP6V0A1Q93050 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ATP6V0A1Q93050 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATP6V0A1Q93050 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ATP6V0A1Q93050 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
ATP6V0A1Q93050 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.06■■□□□ 1.28
ATP6V0A1Q93050 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ATP6V0A1Q93050 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATP6V0A1Q93050 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ATP6V0A1Q93050 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP6V0A1Q93050 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.05■■□□□ 1.28
ATP6V0A1Q93050 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ATP6V0A1Q93050 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ATP6V0A1Q93050 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ATP6V0A1Q93050 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ATP6V0A1Q93050 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC23.05■■□□□ 1.28
ATP6V0A1Q93050 MCRIP2P1-201ENST00000394346 511 ntBASIC23.05■■□□□ 1.28
ATP6V0A1Q93050 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
ATP6V0A1Q93050 AC098590.1-201ENST00000468126 897 ntBASIC23.05■■□□□ 1.28
ATP6V0A1Q93050 RPS2P52-201ENST00000469610 820 ntBASIC23.05■■□□□ 1.28
ATP6V0A1Q93050 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ATP6V0A1Q93050 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
ATP6V0A1Q93050 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ATP6V0A1Q93050 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.05■■□□□ 1.28
ATP6V0A1Q93050 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP6V0A1Q93050 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.04■■□□□ 1.28
ATP6V0A1Q93050 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ATP6V0A1Q93050 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
ATP6V0A1Q93050 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC23.04■■□□□ 1.28
ATP6V0A1Q93050 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP6V0A1Q93050 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP6V0A1Q93050 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP6V0A1Q93050 GATS-209ENST00000454084 1030 ntTSL 3 BASIC23.04■■□□□ 1.28
ATP6V0A1Q93050 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.04■■□□□ 1.28
ATP6V0A1Q93050 UNC93B5-201ENST00000530315 699 ntBASIC23.04■■□□□ 1.28
ATP6V0A1Q93050 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC23.04■■□□□ 1.28
ATP6V0A1Q93050 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
ATP6V0A1Q93050 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP6V0A1Q93050 AL024507.2-201ENST00000606070 2574 ntBASIC23.04■■□□□ 1.28
ATP6V0A1Q93050 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
ATP6V0A1Q93050 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP6V0A1Q93050 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP6V0A1Q93050 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP6V0A1Q93050 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP6V0A1Q93050 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ATP6V0A1Q93050 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
ATP6V0A1Q93050 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP6V0A1Q93050 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
ATP6V0A1Q93050 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC23.03■■□□□ 1.28
ATP6V0A1Q93050 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ATP6V0A1Q93050 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ATP6V0A1Q93050 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
ATP6V0A1Q93050 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ATP6V0A1Q93050 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC23.03■■□□□ 1.28
ATP6V0A1Q93050 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC23.03■■□□□ 1.28
ATP6V0A1Q93050 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
ATP6V0A1Q93050 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ATP6V0A1Q93050 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
ATP6V0A1Q93050 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ATP6V0A1Q93050 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ATP6V0A1Q93050 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
ATP6V0A1Q93050 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATP6V0A1Q93050 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.02■■□□□ 1.28
ATP6V0A1Q93050 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ATP6V0A1Q93050 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ATP6V0A1Q93050 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC23.02■■□□□ 1.28
ATP6V0A1Q93050 AC128676.1-201ENST00000454392 318 ntBASIC23.02■■□□□ 1.28
ATP6V0A1Q93050 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms