Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF138Q8WVD3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF138Q8WVD3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF138Q8WVD3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
RNF138Q8WVD3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF138Q8WVD3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
RNF138Q8WVD3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF138Q8WVD3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF138Q8WVD3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RNF138Q8WVD3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF138Q8WVD3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF138Q8WVD3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF138Q8WVD3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RNF138Q8WVD3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF138Q8WVD3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF138Q8WVD3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
RNF138Q8WVD3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
RNF138Q8WVD3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF138Q8WVD3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF138Q8WVD3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF138Q8WVD3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.7■□□□□ 0.58
RNF138Q8WVD3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
RNF138Q8WVD3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
RNF138Q8WVD3 AC092118.2-201ENST00000613495 667 ntBASIC18.7■□□□□ 0.58
RNF138Q8WVD3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF138Q8WVD3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF138Q8WVD3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF138Q8WVD3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF138Q8WVD3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
RNF138Q8WVD3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF138Q8WVD3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF138Q8WVD3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RNF138Q8WVD3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RNF138Q8WVD3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF138Q8WVD3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RNF138Q8WVD3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF138Q8WVD3 KRT8P36-201ENST00000489121 1440 ntBASIC18.69■□□□□ 0.58
RNF138Q8WVD3 AL137060.1-201ENST00000618151 2648 ntBASIC18.69■□□□□ 0.58
RNF138Q8WVD3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF138Q8WVD3 KRT18P68-201ENST00000392293 1000 ntBASIC18.69■□□□□ 0.58
RNF138Q8WVD3 PGM5P4-201ENST00000421970 445 ntBASIC18.69■□□□□ 0.58
RNF138Q8WVD3 AL355472.2-201ENST00000422958 438 ntBASIC18.69■□□□□ 0.58
RNF138Q8WVD3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
RNF138Q8WVD3 AC105020.6-201ENST00000621523 1217 ntBASIC18.69■□□□□ 0.58
RNF138Q8WVD3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF138Q8WVD3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF138Q8WVD3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF138Q8WVD3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF138Q8WVD3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF138Q8WVD3 KRT17P1-201ENST00000399211 1546 ntBASIC18.69■□□□□ 0.58
RNF138Q8WVD3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RNF138Q8WVD3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF138Q8WVD3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF138Q8WVD3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RNF138Q8WVD3 SLC29A4P1-201ENST00000398760 971 ntBASIC18.68■□□□□ 0.58
RNF138Q8WVD3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF138Q8WVD3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF138Q8WVD3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF138Q8WVD3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.68■□□□□ 0.58
RNF138Q8WVD3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF138Q8WVD3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF138Q8WVD3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF138Q8WVD3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF138Q8WVD3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF138Q8WVD3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF138Q8WVD3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RNF138Q8WVD3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF138Q8WVD3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF138Q8WVD3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF138Q8WVD3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.67■□□□□ 0.58
RNF138Q8WVD3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
RNF138Q8WVD3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF138Q8WVD3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF138Q8WVD3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF138Q8WVD3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF138Q8WVD3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF138Q8WVD3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF138Q8WVD3 AL356652.1-201ENST00000615962 565 ntBASIC18.67■□□□□ 0.58
RNF138Q8WVD3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
RNF138Q8WVD3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF138Q8WVD3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RNF138Q8WVD3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF138Q8WVD3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF138Q8WVD3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF138Q8WVD3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RNF138Q8WVD3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF138Q8WVD3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF138Q8WVD3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
RNF138Q8WVD3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RNF138Q8WVD3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF138Q8WVD3 BX276092.2-201ENST00000417668 665 ntBASIC18.66■□□□□ 0.58
RNF138Q8WVD3 AL138781.1-201ENST00000566567 1274 ntBASIC18.66■□□□□ 0.58
RNF138Q8WVD3 AL589743.5-201ENST00000616611 1050 ntBASIC18.66■□□□□ 0.58
RNF138Q8WVD3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.66■□□□□ 0.58
RNF138Q8WVD3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF138Q8WVD3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RNF138Q8WVD3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF138Q8WVD3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF138Q8WVD3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF138Q8WVD3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms