Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
LRRTM1Q86UE6 AL356441.2-201ENST00000443009 864 ntBASIC17.83■□□□□ 0.44
LRRTM1Q86UE6 AC131281.2-201ENST00000520478 145 ntBASIC17.83■□□□□ 0.44
LRRTM1Q86UE6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.83■□□□□ 0.44
LRRTM1Q86UE6 MIR4767-201ENST00000582827 78 ntBASIC17.83■□□□□ 0.44
LRRTM1Q86UE6 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.83■□□□□ 0.44
LRRTM1Q86UE6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRTM1Q86UE6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRTM1Q86UE6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LRRTM1Q86UE6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRTM1Q86UE6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRTM1Q86UE6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRTM1Q86UE6 AC092720.2-201ENST00000602388 1665 ntBASIC17.83■□□□□ 0.44
LRRTM1Q86UE6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRTM1Q86UE6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.83■□□□□ 0.44
LRRTM1Q86UE6 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LRRTM1Q86UE6 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRTM1Q86UE6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.82■□□□□ 0.44
LRRTM1Q86UE6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LRRTM1Q86UE6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRTM1Q86UE6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRTM1Q86UE6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRTM1Q86UE6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRTM1Q86UE6 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRTM1Q86UE6 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRTM1Q86UE6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRTM1Q86UE6 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRTM1Q86UE6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRTM1Q86UE6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRTM1Q86UE6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.82■□□□□ 0.44
LRRTM1Q86UE6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.82■□□□□ 0.44
LRRTM1Q86UE6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRTM1Q86UE6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRTM1Q86UE6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRTM1Q86UE6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.82■□□□□ 0.44
LRRTM1Q86UE6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRTM1Q86UE6 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRTM1Q86UE6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRTM1Q86UE6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.81■□□□□ 0.44
LRRTM1Q86UE6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRTM1Q86UE6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.81■□□□□ 0.44
LRRTM1Q86UE6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRTM1Q86UE6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRTM1Q86UE6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRTM1Q86UE6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LRRTM1Q86UE6 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRTM1Q86UE6 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRTM1Q86UE6 EEF1DP3-203ENST00000566025 782 ntBASIC17.81■□□□□ 0.44
LRRTM1Q86UE6 AC126544.1-201ENST00000580842 1059 ntBASIC17.81■□□□□ 0.44
LRRTM1Q86UE6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LRRTM1Q86UE6 AC061975.6-201ENST00000579045 1553 ntBASIC17.81■□□□□ 0.44
LRRTM1Q86UE6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.81■□□□□ 0.44
LRRTM1Q86UE6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRTM1Q86UE6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRTM1Q86UE6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
LRRTM1Q86UE6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
LRRTM1Q86UE6 AP004607.4-201ENST00000530158 1459 ntBASIC17.81■□□□□ 0.44
LRRTM1Q86UE6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.81■□□□□ 0.44
LRRTM1Q86UE6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRTM1Q86UE6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LRRTM1Q86UE6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRTM1Q86UE6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRTM1Q86UE6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRTM1Q86UE6 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRTM1Q86UE6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRTM1Q86UE6 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
LRRTM1Q86UE6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.8■□□□□ 0.44
LRRTM1Q86UE6 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRTM1Q86UE6 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRTM1Q86UE6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.8■□□□□ 0.44
LRRTM1Q86UE6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRTM1Q86UE6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRTM1Q86UE6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRTM1Q86UE6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRTM1Q86UE6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LRRTM1Q86UE6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRTM1Q86UE6 SMG8-203ENST00000578922 2178 ntBASIC17.8■□□□□ 0.44
LRRTM1Q86UE6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
LRRTM1Q86UE6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
LRRTM1Q86UE6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRTM1Q86UE6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRTM1Q86UE6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LRRTM1Q86UE6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRTM1Q86UE6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.79■□□□□ 0.44
LRRTM1Q86UE6 AC053503.5-201ENST00000601508 636 ntBASIC17.79■□□□□ 0.44
LRRTM1Q86UE6 AC105233.4-201ENST00000642045 216 ntBASIC17.79■□□□□ 0.44
LRRTM1Q86UE6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRTM1Q86UE6 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRTM1Q86UE6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LRRTM1Q86UE6 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRTM1Q86UE6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.79■□□□□ 0.44
LRRTM1Q86UE6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LRRTM1Q86UE6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRRTM1Q86UE6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
LRRTM1Q86UE6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.78■□□□□ 0.44
LRRTM1Q86UE6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRRTM1Q86UE6 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
LRRTM1Q86UE6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.78■□□□□ 0.44
LRRTM1Q86UE6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.78■□□□□ 0.44
LRRTM1Q86UE6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms