Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 snR34snR34 203 nt1.42□□□□□ -2.18
HRD1Q08109 YBR174CYBR174C 315 nt1.42□□□□□ -2.18
HRD1Q08109 PET309YLR067C 2898 nt1.42□□□□□ -2.18
HRD1Q08109 YLR422WYLR422W 5799 nt1.41□□□□□ -2.18
HRD1Q08109 YDR018CYDR018C 1191 nt1.41□□□□□ -2.18
HRD1Q08109 RGI1YER067W 486 nt1.41□□□□□ -2.18
HRD1Q08109 YGL118CYGL118C 438 nt1.41□□□□□ -2.18
HRD1Q08109 HOT13YKL084W 351 nt1.41□□□□□ -2.18
HRD1Q08109 YLR042CYLR042C 486 nt1.41□□□□□ -2.18
HRD1Q08109 YNL089CYNL089C 477 nt1.41□□□□□ -2.18
HRD1Q08109 GIM3YNL153C 390 nt1.41□□□□□ -2.18
HRD1Q08109 YBR197CYBR197C 654 nt1.41□□□□□ -2.18
HRD1Q08109 PEX8YGR077C 1770 nt1.41□□□□□ -2.18
HRD1Q08109 SRB4YER022W 2064 nt1.41□□□□□ -2.18
HRD1Q08109 CDC37YDR168W 1521 nt1.4□□□□□ -2.18
HRD1Q08109 YIL166CYIL166C 1629 nt1.4□□□□□ -2.18
HRD1Q08109 DAL5YJR152W 1632 nt1.4□□□□□ -2.18
HRD1Q08109 TDA9YML081W 3756 nt1.4□□□□□ -2.19
HRD1Q08109 SSK2YNR031C 4740 nt1.4□□□□□ -2.19
HRD1Q08109 YJL049WYJL049W 1353 nt1.4□□□□□ -2.19
HRD1Q08109 YJL147CYJL147C 1149 nt1.4□□□□□ -2.19
HRD1Q08109 ICS2YBR157C 768 nt1.4□□□□□ -2.19
HRD1Q08109 YCL007CYCL007C 393 nt1.4□□□□□ -2.19
HRD1Q08109 PES4YFR023W 1836 nt1.4□□□□□ -2.19
HRD1Q08109 SRP1YNL189W 1629 nt1.4□□□□□ -2.19
HRD1Q08109 ATG11YPR049C 3537 nt1.4□□□□□ -2.19
HRD1Q08109 BRR2YER172C 6492 nt1.39□□□□□ -2.19
HRD1Q08109 YJR039WYJR039W 3366 nt1.39□□□□□ -2.19
HRD1Q08109 AIM6YDL237W 1173 nt1.39□□□□□ -2.19
HRD1Q08109 PLP1YDR183W 693 nt1.39□□□□□ -2.19
HRD1Q08109 YGL177WYGL177W 348 nt1.39□□□□□ -2.19
HRD1Q08109 CTK2YJL006C 972 nt1.39□□□□□ -2.19
HRD1Q08109 YJL133C-AYJL133C-A 225 nt1.39□□□□□ -2.19
HRD1Q08109 YMR230W-AYMR230W-A 189 nt1.39□□□□□ -2.19
HRD1Q08109 YOR146WYOR146W 306 nt1.39□□□□□ -2.19
HRD1Q08109 BFR1YOR198C 1413 nt1.39□□□□□ -2.19
HRD1Q08109 STI1YOR027W 1770 nt1.39□□□□□ -2.19
HRD1Q08109 TRZ1YKR079C 2517 nt1.38□□□□□ -2.19
HRD1Q08109 YOR019WYOR019W 2193 nt1.38□□□□□ -2.19
HRD1Q08109 SNU23YDL098C 585 nt1.38□□□□□ -2.19
HRD1Q08109 KEI1YDR367W 666 nt1.38□□□□□ -2.19
HRD1Q08109 YGR109W-AYGR109W-A 873 nt1.38□□□□□ -2.19
HRD1Q08109 YPT52YKR014C 705 nt1.38□□□□□ -2.19
HRD1Q08109 CDC5YMR001C 2118 nt1.37□□□□□ -2.19
HRD1Q08109 CHS1YNL192W 3396 nt1.37□□□□□ -2.19
HRD1Q08109 YCR024C-BYCR024C-B 267 nt1.37□□□□□ -2.19
HRD1Q08109 YCR099CYCR099C 468 nt1.37□□□□□ -2.19
HRD1Q08109 COG7YGL005C 840 nt1.37□□□□□ -2.19
HRD1Q08109 CCE1YKL011C 1062 nt1.37□□□□□ -2.19
HRD1Q08109 ECI1YLR284C 843 nt1.37□□□□□ -2.19
HRD1Q08109 FAR3YMR052W 615 nt1.37□□□□□ -2.19
HRD1Q08109 ATX2YOR079C 942 nt1.37□□□□□ -2.19
HRD1Q08109 YOR333CYOR333C 417 nt1.37□□□□□ -2.19
HRD1Q08109 TRM7YBR061C 933 nt1.37□□□□□ -2.19
HRD1Q08109 YPL238CYPL238C 390 nt1.37□□□□□ -2.19
HRD1Q08109 YDR341CYDR341C 1824 nt1.37□□□□□ -2.19
HRD1Q08109 HKR1YDR420W 5409 nt1.37□□□□□ -2.19
HRD1Q08109 PET127YOR017W 2403 nt1.37□□□□□ -2.19
HRD1Q08109 SYH1YPL105C 2550 nt1.37□□□□□ -2.19
HRD1Q08109 FUS2YMR232W 2034 nt1.37□□□□□ -2.19
HRD1Q08109 NAM7YMR080C 2916 nt1.36□□□□□ -2.19
HRD1Q08109 PSO2YMR137C 1986 nt1.36□□□□□ -2.19
HRD1Q08109 MNE1YOR350C 1992 nt1.36□□□□□ -2.19
HRD1Q08109 BPH1YCR032W 6504 nt1.36□□□□□ -2.19
HRD1Q08109 YLR053CYLR053C 327 nt1.36□□□□□ -2.19
HRD1Q08109 ATG38YLR211C 681 nt1.36□□□□□ -2.19
HRD1Q08109 CSI2YOL007C 1026 nt1.36□□□□□ -2.19
HRD1Q08109 BAG7YOR134W 1230 nt1.36□□□□□ -2.19
HRD1Q08109 LEU3YLR451W 2661 nt1.35□□□□□ -2.19
HRD1Q08109 ASG1YIL130W 2895 nt1.35□□□□□ -2.19
HRD1Q08109 UBP1YDL122W 2430 nt1.35□□□□□ -2.19
HRD1Q08109 PBP4YDL053C 558 nt1.35□□□□□ -2.19
HRD1Q08109 ATP17YDR377W 306 nt1.35□□□□□ -2.19
HRD1Q08109 GOS1YHL031C 672 nt1.35□□□□□ -2.19
HRD1Q08109 YHL048C-AYHL048C-A 135 nt1.35□□□□□ -2.19
HRD1Q08109 YKE2YLR200W 345 nt1.35□□□□□ -2.19
HRD1Q08109 FMP41YNL168C 780 nt1.35□□□□□ -2.19
HRD1Q08109 IZH4YOL101C 939 nt1.35□□□□□ -2.19
HRD1Q08109 TAZ1YPR140W 1146 nt1.35□□□□□ -2.19
HRD1Q08109 YCL023CYCL023C 348 nt1.35□□□□□ -2.19
HRD1Q08109 SAC3YDR159W 3906 nt1.35□□□□□ -2.19
HRD1Q08109 LYS9YNR050C 1341 nt1.35□□□□□ -2.19
HRD1Q08109 SXM1YDR395W 2835 nt1.34□□□□□ -2.19
HRD1Q08109 YCR087C-AYCR087C-A 462 nt1.34□□□□□ -2.19
HRD1Q08109 SNA4YDL123W 423 nt1.34□□□□□ -2.19
HRD1Q08109 VAB2YEL005C 849 nt1.34□□□□□ -2.19
HRD1Q08109 YER046W-AYER046W-A 330 nt1.34□□□□□ -2.19
HRD1Q08109 SHE2YKL130C 741 nt1.34□□□□□ -2.19
HRD1Q08109 GSP1YLR293C 660 nt1.34□□□□□ -2.19
HRD1Q08109 ATX1YNL259C 222 nt1.34□□□□□ -2.19
HRD1Q08109 SGT1YOR057W 1188 nt1.34□□□□□ -2.19
HRD1Q08109 TOA1YOR194C 861 nt1.34□□□□□ -2.19
HRD1Q08109 FYV8YGR196C 2454 nt1.34□□□□□ -2.2
HRD1Q08109 HSE1YHL002W 1359 nt1.34□□□□□ -2.2
HRD1Q08109 YBP2YGL060W 1926 nt1.33□□□□□ -2.2
HRD1Q08109 YCR090CYCR090C 549 nt1.33□□□□□ -2.2
HRD1Q08109 RPL31AYDL075W 342 nt1.33□□□□□ -2.2
HRD1Q08109 CRD1YDL142C 852 nt1.33□□□□□ -2.2
HRD1Q08109 PPE1YHR075C 1203 nt1.33□□□□□ -2.2
HRD1Q08109 TEN1YLR010C 483 nt1.33□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 22.7 ms