Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIST1H1AQ02539 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC15.67■□□□□ 0.1
HIST1H1AQ02539 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC15.67■□□□□ 0.1
HIST1H1AQ02539 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIST1H1AQ02539 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC15.67■□□□□ 0.1
HIST1H1AQ02539 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC15.67■□□□□ 0.1
HIST1H1AQ02539 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HIST1H1AQ02539 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIST1H1AQ02539 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIST1H1AQ02539 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIST1H1AQ02539 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIST1H1AQ02539 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC15.67■□□□□ 0.1
HIST1H1AQ02539 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC15.67■□□□□ 0.1
HIST1H1AQ02539 AC142381.2-201ENST00000566120 298 ntBASIC15.67■□□□□ 0.1
HIST1H1AQ02539 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HIST1H1AQ02539 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC15.67■□□□□ 0.1
HIST1H1AQ02539 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIST1H1AQ02539 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HIST1H1AQ02539 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIST1H1AQ02539 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIST1H1AQ02539 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIST1H1AQ02539 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC15.67■□□□□ 0.1
HIST1H1AQ02539 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HIST1H1AQ02539 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIST1H1AQ02539 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HIST1H1AQ02539 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HIST1H1AQ02539 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HIST1H1AQ02539 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIST1H1AQ02539 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HIST1H1AQ02539 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HIST1H1AQ02539 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
HIST1H1AQ02539 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HIST1H1AQ02539 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
HIST1H1AQ02539 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIST1H1AQ02539 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIST1H1AQ02539 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
HIST1H1AQ02539 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIST1H1AQ02539 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIST1H1AQ02539 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC15.66■□□□□ 0.1
HIST1H1AQ02539 AL031432.3-201ENST00000607698 485 ntBASIC15.66■□□□□ 0.1
HIST1H1AQ02539 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIST1H1AQ02539 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HIST1H1AQ02539 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.66■□□□□ 0.1
HIST1H1AQ02539 LINC01006-201ENST00000333319 2292 ntBASIC15.66■□□□□ 0.1
HIST1H1AQ02539 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIST1H1AQ02539 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HIST1H1AQ02539 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HIST1H1AQ02539 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HIST1H1AQ02539 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HIST1H1AQ02539 HCG11-201ENST00000411553 5696 ntBASIC15.66■□□□□ 0.1
HIST1H1AQ02539 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
HIST1H1AQ02539 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC15.65■□□□□ 0.1
HIST1H1AQ02539 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC15.65■□□□□ 0.1
HIST1H1AQ02539 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
HIST1H1AQ02539 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HIST1H1AQ02539 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HIST1H1AQ02539 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HIST1H1AQ02539 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HIST1H1AQ02539 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HIST1H1AQ02539 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HIST1H1AQ02539 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC15.65■□□□□ 0.1
HIST1H1AQ02539 AC012414.1-201ENST00000556676 535 ntBASIC15.65■□□□□ 0.1
HIST1H1AQ02539 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC15.65■□□□□ 0.1
HIST1H1AQ02539 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC15.65■□□□□ 0.1
HIST1H1AQ02539 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HIST1H1AQ02539 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HIST1H1AQ02539 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HIST1H1AQ02539 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HIST1H1AQ02539 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HIST1H1AQ02539 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HIST1H1AQ02539 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HIST1H1AQ02539 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.65■□□□□ 0.1
HIST1H1AQ02539 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HIST1H1AQ02539 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC15.65■□□□□ 0.1
HIST1H1AQ02539 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
HIST1H1AQ02539 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HIST1H1AQ02539 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HIST1H1AQ02539 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC15.64■□□□□ 0.09
HIST1H1AQ02539 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HIST1H1AQ02539 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.64■□□□□ 0.09
HIST1H1AQ02539 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HIST1H1AQ02539 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HIST1H1AQ02539 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HIST1H1AQ02539 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HIST1H1AQ02539 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC15.64■□□□□ 0.09
HIST1H1AQ02539 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HIST1H1AQ02539 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HIST1H1AQ02539 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC15.64■□□□□ 0.09
HIST1H1AQ02539 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
HIST1H1AQ02539 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC15.64■□□□□ 0.09
HIST1H1AQ02539 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC15.64■□□□□ 0.09
HIST1H1AQ02539 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC15.64■□□□□ 0.09
HIST1H1AQ02539 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
HIST1H1AQ02539 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
HIST1H1AQ02539 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
HIST1H1AQ02539 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HIST1H1AQ02539 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HIST1H1AQ02539 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
HIST1H1AQ02539 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HIST1H1AQ02539 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms