Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CX3CL1P78423 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.53■□□□□ 0.24
CX3CL1P78423 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CX3CL1P78423 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CX3CL1P78423 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
CX3CL1P78423 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CX3CL1P78423 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CX3CL1P78423 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CX3CL1P78423 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CX3CL1P78423 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CX3CL1P78423 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CX3CL1P78423 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CX3CL1P78423 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.53■□□□□ 0.24
CX3CL1P78423 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.53■□□□□ 0.24
CX3CL1P78423 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.53■□□□□ 0.24
CX3CL1P78423 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CX3CL1P78423 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.53■□□□□ 0.24
CX3CL1P78423 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CX3CL1P78423 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CX3CL1P78423 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CX3CL1P78423 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CX3CL1P78423 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CX3CL1P78423 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CX3CL1P78423 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CX3CL1P78423 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CX3CL1P78423 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CX3CL1P78423 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CX3CL1P78423 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CX3CL1P78423 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.52■□□□□ 0.24
CX3CL1P78423 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CX3CL1P78423 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.52■□□□□ 0.24
CX3CL1P78423 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
CX3CL1P78423 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CX3CL1P78423 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CX3CL1P78423 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CX3CL1P78423 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.52■□□□□ 0.23
CX3CL1P78423 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CX3CL1P78423 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CX3CL1P78423 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CX3CL1P78423 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CX3CL1P78423 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CX3CL1P78423 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CX3CL1P78423 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CX3CL1P78423 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.51■□□□□ 0.23
CX3CL1P78423 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CX3CL1P78423 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CX3CL1P78423 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CX3CL1P78423 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CX3CL1P78423 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CX3CL1P78423 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CX3CL1P78423 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CX3CL1P78423 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.51■□□□□ 0.23
CX3CL1P78423 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CX3CL1P78423 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CX3CL1P78423 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.51■□□□□ 0.23
CX3CL1P78423 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CX3CL1P78423 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CX3CL1P78423 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CX3CL1P78423 AC137761.2-201ENST00000561729 223 ntBASIC16.51■□□□□ 0.23
CX3CL1P78423 SLC7A5P1-201ENST00000568957 537 ntBASIC16.51■□□□□ 0.23
CX3CL1P78423 AC145350.3-201ENST00000569033 163 ntBASIC16.51■□□□□ 0.23
CX3CL1P78423 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.51■□□□□ 0.23
CX3CL1P78423 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CX3CL1P78423 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.51■□□□□ 0.23
CX3CL1P78423 UBE2DNL-204ENST00000602536 740 ntBASIC16.51■□□□□ 0.23
CX3CL1P78423 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CX3CL1P78423 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
CX3CL1P78423 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.51■□□□□ 0.23
CX3CL1P78423 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
CX3CL1P78423 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CX3CL1P78423 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
CX3CL1P78423 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CX3CL1P78423 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.5■□□□□ 0.23
CX3CL1P78423 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.5■□□□□ 0.23
CX3CL1P78423 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.5■□□□□ 0.23
CX3CL1P78423 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.5■□□□□ 0.23
CX3CL1P78423 AC007952.6-201ENST00000573168 2673 ntBASIC16.5■□□□□ 0.23
CX3CL1P78423 AC003957.1-201ENST00000625108 2673 ntBASIC16.5■□□□□ 0.23
CX3CL1P78423 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CX3CL1P78423 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CX3CL1P78423 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CX3CL1P78423 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.5■□□□□ 0.23
CX3CL1P78423 AC245052.3-201ENST00000450182 901 ntBASIC16.5■□□□□ 0.23
CX3CL1P78423 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.5■□□□□ 0.23
CX3CL1P78423 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.5■□□□□ 0.23
CX3CL1P78423 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.5■□□□□ 0.23
CX3CL1P78423 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.5■□□□□ 0.23
CX3CL1P78423 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.5■□□□□ 0.23
CX3CL1P78423 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CX3CL1P78423 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CX3CL1P78423 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CX3CL1P78423 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CX3CL1P78423 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CX3CL1P78423 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CX3CL1P78423 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.5■□□□□ 0.23
CX3CL1P78423 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
CX3CL1P78423 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CX3CL1P78423 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.49■□□□□ 0.23
CX3CL1P78423 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CX3CL1P78423 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms