Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.07■□□□□ 0.8
YBX1P67809 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
YBX1P67809 AC073111.5-205ENST00000641717 521 ntBASIC20.07■□□□□ 0.8
YBX1P67809 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.07■□□□□ 0.8
YBX1P67809 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
YBX1P67809 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.07■□□□□ 0.8
YBX1P67809 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
YBX1P67809 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
YBX1P67809 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
YBX1P67809 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
YBX1P67809 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
YBX1P67809 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
YBX1P67809 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
YBX1P67809 PCDHAC2-203ENST00000615316 3011 ntBASIC20.06■□□□□ 0.8
YBX1P67809 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.06■□□□□ 0.8
YBX1P67809 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
YBX1P67809 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
YBX1P67809 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
YBX1P67809 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
YBX1P67809 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.06■□□□□ 0.8
YBX1P67809 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
YBX1P67809 CNN2P6-201ENST00000439038 900 ntBASIC20.06■□□□□ 0.8
YBX1P67809 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.06■□□□□ 0.8
YBX1P67809 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.06■□□□□ 0.8
YBX1P67809 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.06■□□□□ 0.8
YBX1P67809 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
YBX1P67809 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
YBX1P67809 AC073314.1-201ENST00000568729 2216 ntBASIC20.06■□□□□ 0.8
YBX1P67809 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
YBX1P67809 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
YBX1P67809 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
YBX1P67809 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
YBX1P67809 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
YBX1P67809 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
YBX1P67809 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
YBX1P67809 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
YBX1P67809 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
YBX1P67809 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
YBX1P67809 RAP2CP1-201ENST00000605103 478 ntBASIC20.05■□□□□ 0.8
YBX1P67809 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
YBX1P67809 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
YBX1P67809 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
YBX1P67809 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
YBX1P67809 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.05■□□□□ 0.8
YBX1P67809 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.05■□□□□ 0.8
YBX1P67809 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.05■□□□□ 0.8
YBX1P67809 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
YBX1P67809 PLK5-205ENST00000642079 1969 ntBASIC20.04■□□□□ 0.8
YBX1P67809 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
YBX1P67809 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
YBX1P67809 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
YBX1P67809 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.04■□□□□ 0.8
YBX1P67809 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.04■□□□□ 0.8
YBX1P67809 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.04■□□□□ 0.8
YBX1P67809 TERF1P5-201ENST00000477545 1207 ntBASIC20.04■□□□□ 0.8
YBX1P67809 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.04■□□□□ 0.8
YBX1P67809 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
YBX1P67809 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.04■□□□□ 0.8
YBX1P67809 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
YBX1P67809 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
YBX1P67809 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.04■□□□□ 0.8
YBX1P67809 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.04■□□□□ 0.8
YBX1P67809 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
YBX1P67809 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
YBX1P67809 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
YBX1P67809 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
YBX1P67809 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.03■□□□□ 0.8
YBX1P67809 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
YBX1P67809 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
YBX1P67809 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
YBX1P67809 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
YBX1P67809 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
YBX1P67809 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
YBX1P67809 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
YBX1P67809 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.03■□□□□ 0.8
YBX1P67809 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.03■□□□□ 0.8
YBX1P67809 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
YBX1P67809 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
YBX1P67809 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.03■□□□□ 0.8
YBX1P67809 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
YBX1P67809 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.03■□□□□ 0.8
YBX1P67809 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
YBX1P67809 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
YBX1P67809 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
YBX1P67809 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.03■□□□□ 0.8
YBX1P67809 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
YBX1P67809 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
YBX1P67809 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
YBX1P67809 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.02■□□□□ 0.8
YBX1P67809 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
YBX1P67809 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
YBX1P67809 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
YBX1P67809 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
YBX1P67809 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.02■□□□□ 0.8
YBX1P67809 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.02■□□□□ 0.8
YBX1P67809 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
YBX1P67809 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
YBX1P67809 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
YBX1P67809 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
YBX1P67809 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms