Protein–RNA interactions for Protein: P46673

NUP85, Nucleoporin NUP85, yeastyeast

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP85P46673 YJR140W-AYJR140W-A 150 nt4.36□□□□□ -1.71
NUP85P46673 PEX11YOL147C 711 nt4.36□□□□□ -1.71
NUP85P46673 NTC20YBR188C 423 nt4.36□□□□□ -1.71
NUP85P46673 BEM4YPL161C 1902 nt4.35□□□□□ -1.71
NUP85P46673 tK(CUU)CtK(CUU)C 73 nt4.35□□□□□ -1.71
NUP85P46673 tK(CUU)D1tK(CUU)D1 73 nt4.35□□□□□ -1.71
NUP85P46673 tK(CUU)D2tK(CUU)D2 73 nt4.35□□□□□ -1.71
NUP85P46673 tK(CUU)E1tK(CUU)E1 73 nt4.35□□□□□ -1.71
NUP85P46673 tK(CUU)E2tK(CUU)E2 73 nt4.35□□□□□ -1.71
NUP85P46673 tK(CUU)FtK(CUU)F 73 nt4.35□□□□□ -1.71
NUP85P46673 tK(CUU)G1tK(CUU)G1 73 nt4.35□□□□□ -1.71
NUP85P46673 tK(CUU)G2tK(CUU)G2 73 nt4.35□□□□□ -1.71
NUP85P46673 tK(CUU)G3tK(CUU)G3 73 nt4.35□□□□□ -1.71
NUP85P46673 tK(CUU)ItK(CUU)I 73 nt4.35□□□□□ -1.71
NUP85P46673 tK(CUU)JtK(CUU)J 73 nt4.35□□□□□ -1.71
NUP85P46673 tK(CUU)KtK(CUU)K 73 nt4.35□□□□□ -1.71
NUP85P46673 tK(CUU)MtK(CUU)M 73 nt4.35□□□□□ -1.71
NUP85P46673 tK(CUU)PtK(CUU)P 73 nt4.35□□□□□ -1.71
NUP85P46673 COA3YJL062W-A 258 nt4.35□□□□□ -1.71
NUP85P46673 YPL278CYPL278C 303 nt4.35□□□□□ -1.71
NUP85P46673 DNM1YLL001W 2274 nt4.35□□□□□ -1.71
NUP85P46673 MTR10YOR160W 2919 nt4.35□□□□□ -1.71
NUP85P46673 FRE4YNR060W 2160 nt4.34□□□□□ -1.71
NUP85P46673 YDR250CYDR250C 276 nt4.34□□□□□ -1.71
NUP85P46673 YER091C-AYER091C-A 222 nt4.34□□□□□ -1.71
NUP85P46673 YOR381W-AYOR381W-A 168 nt4.34□□□□□ -1.71
NUP85P46673 TRM7YBR061C 933 nt4.34□□□□□ -1.71
NUP85P46673 YBR224WYBR224W 516 nt4.34□□□□□ -1.71
NUP85P46673 BIT61YJL058C 1632 nt4.34□□□□□ -1.71
NUP85P46673 PTR3YFR029W 2037 nt4.34□□□□□ -1.71
NUP85P46673 NUP133YKR082W 3474 nt4.33□□□□□ -1.72
NUP85P46673 HMG1YML075C 3165 nt4.33□□□□□ -1.72
NUP85P46673 FLC1YPL221W 2382 nt4.33□□□□□ -1.72
NUP85P46673 NUP2YLR335W 2163 nt4.33□□□□□ -1.72
NUP85P46673 YIL165CYIL165C 360 nt4.33□□□□□ -1.72
NUP85P46673 NAN1YPL126W 2691 nt4.33□□□□□ -1.72
NUP85P46673 ELM1YKL048C 1923 nt4.33□□□□□ -1.72
NUP85P46673 MDM32YOR147W 1869 nt4.32□□□□□ -1.72
NUP85P46673 PSF1YDR013W 627 nt4.32□□□□□ -1.72
NUP85P46673 RPS24AYER074W 408 nt4.32□□□□□ -1.72
NUP85P46673 RPS26BYER131W 360 nt4.32□□□□□ -1.72
NUP85P46673 tS(AGA)D3tS(AGA)D3 83 nt4.32□□□□□ -1.72
NUP85P46673 YBL028CYBL028C 321 nt4.32□□□□□ -1.72
NUP85P46673 BCK2YER167W 2556 nt4.32□□□□□ -1.72
NUP85P46673 EGT2YNL327W 3126 nt4.32□□□□□ -1.72
NUP85P46673 FRT2YAL028W 1587 nt4.31□□□□□ -1.72
NUP85P46673 MET4YNL103W 2019 nt4.31□□□□□ -1.72
NUP85P46673 TCO89YPL180W 2400 nt4.31□□□□□ -1.72
NUP85P46673 ULP1YPL020C 1866 nt4.31□□□□□ -1.72
NUP85P46673 DPB11YJL090C 2295 nt4.31□□□□□ -1.72
NUP85P46673 IRC3YDR332W 2070 nt4.31□□□□□ -1.72
NUP85P46673 LYP1YNL268W 1836 nt4.3□□□□□ -1.72
NUP85P46673 SKG6YHR149C 2205 nt4.3□□□□□ -1.72
NUP85P46673 RDH54YBR073W 2877 nt4.3□□□□□ -1.72
NUP85P46673 SNF2YOR290C 5112 nt4.3□□□□□ -1.72
NUP85P46673 ECM34YHL043W 513 nt4.3□□□□□ -1.72
NUP85P46673 RFC3YNL290W 1023 nt4.3□□□□□ -1.72
NUP85P46673 VPS41YDR080W 2979 nt4.3□□□□□ -1.72
NUP85P46673 ADP1YCR011C 3150 nt4.3□□□□□ -1.72
NUP85P46673 AIP1YMR092C 1848 nt4.3□□□□□ -1.72
NUP85P46673 YER077CYER077C 2067 nt4.3□□□□□ -1.72
NUP85P46673 PBS2YJL128C 2007 nt4.29□□□□□ -1.72
NUP85P46673 ALR2YFL050C 2577 nt4.29□□□□□ -1.72
NUP85P46673 tL(UAG)JtL(UAG)J 82 nt4.29□□□□□ -1.72
NUP85P46673 tL(UAG)L1tL(UAG)L1 82 nt4.29□□□□□ -1.72
NUP85P46673 tL(UAG)L2tL(UAG)L2 82 nt4.29□□□□□ -1.72
NUP85P46673 YGL217CYGL217C 342 nt4.29□□□□□ -1.72
NUP85P46673 RPS27BYHR021C 249 nt4.29□□□□□ -1.72
NUP85P46673 FAA1YOR317W 2103 nt4.29□□□□□ -1.72
NUP85P46673 MET12YPL023C 1974 nt4.29□□□□□ -1.72
NUP85P46673 FOX2YKR009C 2703 nt4.29□□□□□ -1.72
NUP85P46673 AI5_ALPHAQ0070 1893 nt4.28□□□□□ -1.72
NUP85P46673 DIP2YLR129W 2832 nt4.28□□□□□ -1.72
NUP85P46673 SIN4YNL236W 2925 nt4.28□□□□□ -1.72
NUP85P46673 NAM2YLR382C 2685 nt4.28□□□□□ -1.72
NUP85P46673 snR60snR60 104 nt4.28□□□□□ -1.72
NUP85P46673 YKR033CYKR033C 426 nt4.28□□□□□ -1.72
NUP85P46673 PCC1YKR095W-A 267 nt4.28□□□□□ -1.72
NUP85P46673 YMR321CYMR321C 318 nt4.28□□□□□ -1.72
NUP85P46673 snR46snR46 197 nt4.28□□□□□ -1.72
NUP85P46673 SIP1YDR422C 2448 nt4.28□□□□□ -1.72
NUP85P46673 REV1YOR346W 2958 nt4.28□□□□□ -1.72
NUP85P46673 RSC3YDR303C 2658 nt4.28□□□□□ -1.73
NUP85P46673 TIF4631YGR162W 2859 nt4.28□□□□□ -1.73
NUP85P46673 YBR238CYBR238C 2196 nt4.27□□□□□ -1.73
NUP85P46673 SSP1YHR184W 1716 nt4.27□□□□□ -1.73
NUP85P46673 SPT10YJL127C 1923 nt4.27□□□□□ -1.73
NUP85P46673 snR7-SsnR7-S 179 nt4.27□□□□□ -1.73
NUP85P46673 SWC7YLR385C 399 nt4.27□□□□□ -1.73
NUP85P46673 snR52snR52 92 nt4.27□□□□□ -1.73
NUP85P46673 PEX8YGR077C 1770 nt4.27□□□□□ -1.73
NUP85P46673 EPO1YMR124W 2832 nt4.27□□□□□ -1.73
NUP85P46673 TDA1YMR291W 1761 nt4.26□□□□□ -1.73
NUP85P46673 REB1YBR049C 2433 nt4.26□□□□□ -1.73
NUP85P46673 OLE1YGL055W 1533 nt4.26□□□□□ -1.73
NUP85P46673 CYM1YDR430C 2970 nt4.25□□□□□ -1.73
NUP85P46673 LSM1YJL124C 519 nt4.25□□□□□ -1.73
NUP85P46673 YNL097C-BYNL097C-B 123 nt4.25□□□□□ -1.73
NUP85P46673 RPL32YBL092W 393 nt4.25□□□□□ -1.73
NUP85P46673 SRP68YPL243W 1800 nt4.25□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 56 ms