Protein–RNA interactions for Protein: P38165

RTG3, Retrograde regulation protein 3, yeastyeast

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTG3P38165 tK(CUU)G2tK(CUU)G2 73 nt5.57□□□□□ -1.52
RTG3P38165 tK(CUU)G3tK(CUU)G3 73 nt5.57□□□□□ -1.52
RTG3P38165 tK(CUU)ItK(CUU)I 73 nt5.57□□□□□ -1.52
RTG3P38165 tK(CUU)JtK(CUU)J 73 nt5.57□□□□□ -1.52
RTG3P38165 tK(CUU)KtK(CUU)K 73 nt5.57□□□□□ -1.52
RTG3P38165 tK(CUU)MtK(CUU)M 73 nt5.57□□□□□ -1.52
RTG3P38165 tK(CUU)PtK(CUU)P 73 nt5.57□□□□□ -1.52
RTG3P38165 tL(UAG)JtL(UAG)J 82 nt5.57□□□□□ -1.52
RTG3P38165 tL(UAG)L1tL(UAG)L1 82 nt5.57□□□□□ -1.52
RTG3P38165 tL(UAG)L2tL(UAG)L2 82 nt5.57□□□□□ -1.52
RTG3P38165 RPS27BYHR021C 249 nt5.57□□□□□ -1.52
RTG3P38165 RRT15YLR162W-A 189 nt5.57□□□□□ -1.52
RTG3P38165 PIN4YBL051C 2007 nt5.57□□□□□ -1.52
RTG3P38165 MBP1YDL056W 2502 nt5.56□□□□□ -1.52
RTG3P38165 NHX1YDR456W 1902 nt5.56□□□□□ -1.52
RTG3P38165 snR7-SsnR7-S 179 nt5.56□□□□□ -1.52
RTG3P38165 snR32snR32 188 nt5.56□□□□□ -1.52
RTG3P38165 PUT2YHR037W 1728 nt5.56□□□□□ -1.52
RTG3P38165 REB1YBR049C 2433 nt5.56□□□□□ -1.52
RTG3P38165 MET4YNL103W 2019 nt5.55□□□□□ -1.52
RTG3P38165 SPT10YJL127C 1923 nt5.55□□□□□ -1.52
RTG3P38165 AIM9YER080W 1884 nt5.55□□□□□ -1.52
RTG3P38165 KIN2YLR096W 3444 nt5.55□□□□□ -1.52
RTG3P38165 NUP2YLR335W 2163 nt5.55□□□□□ -1.52
RTG3P38165 PSE1YMR308C 3270 nt5.54□□□□□ -1.52
RTG3P38165 PCC1YKR095W-A 267 nt5.54□□□□□ -1.52
RTG3P38165 MIP6YHR015W 1980 nt5.54□□□□□ -1.52
RTG3P38165 MES1YGR264C 2256 nt5.54□□□□□ -1.52
RTG3P38165 GAC1YOR178C 2382 nt5.53□□□□□ -1.52
RTG3P38165 PEX8YGR077C 1770 nt5.53□□□□□ -1.52
RTG3P38165 LSM1YJL124C 519 nt5.53□□□□□ -1.52
RTG3P38165 YLR346CYLR346C 306 nt5.53□□□□□ -1.52
RTG3P38165 YMR321CYMR321C 318 nt5.53□□□□□ -1.52
RTG3P38165 CCT7YJL111W 1653 nt5.53□□□□□ -1.52
RTG3P38165 tQ(UUG)CtQ(UUG)C 72 nt5.52□□□□□ -1.53
RTG3P38165 tQ(UUG)D1tQ(UUG)D1 72 nt5.52□□□□□ -1.53
RTG3P38165 tQ(UUG)D2tQ(UUG)D2 72 nt5.52□□□□□ -1.53
RTG3P38165 tQ(UUG)D3tQ(UUG)D3 72 nt5.52□□□□□ -1.53
RTG3P38165 tQ(UUG)E1tQ(UUG)E1 72 nt5.52□□□□□ -1.53
RTG3P38165 tQ(UUG)HtQ(UUG)H 72 nt5.52□□□□□ -1.53
RTG3P38165 tQ(UUG)LtQ(UUG)L 72 nt5.52□□□□□ -1.53
RTG3P38165 tT(UGU)Q1tT(UGU)Q1 76 nt5.52□□□□□ -1.53
RTG3P38165 AI5_ALPHAQ0070 1893 nt5.51□□□□□ -1.53
RTG3P38165 YBR259WYBR259W 2067 nt5.51□□□□□ -1.53
RTG3P38165 YJL020W-AYJL020W-A 258 nt5.51□□□□□ -1.53
RTG3P38165 YNL097C-BYNL097C-B 123 nt5.51□□□□□ -1.53
RTG3P38165 YOR161W-BYOR161W-B 261 nt5.51□□□□□ -1.53
RTG3P38165 MSK1YNL073W 1731 nt5.51□□□□□ -1.53
RTG3P38165 ADP1YCR011C 3150 nt5.51□□□□□ -1.53
RTG3P38165 HPC2YBR215W 1878 nt5.5□□□□□ -1.53
RTG3P38165 snR60snR60 104 nt5.5□□□□□ -1.53
RTG3P38165 HPA3YEL066W 540 nt5.5□□□□□ -1.53
RTG3P38165 YHL041WYHL041W 450 nt5.5□□□□□ -1.53
RTG3P38165 RDN5-1RDN5-1 121 nt5.5□□□□□ -1.53
RTG3P38165 RDN5-6RDN5-6 121 nt5.5□□□□□ -1.53
RTG3P38165 YPL182CYPL182C 384 nt5.5□□□□□ -1.53
RTG3P38165 YPR063CYPR063C 423 nt5.5□□□□□ -1.53
RTG3P38165 PRP42YDR235W 1635 nt5.49□□□□□ -1.53
RTG3P38165 NUP60YAR002W 1620 nt5.49□□□□□ -1.53
RTG3P38165 RPL32YBL092W 393 nt5.49□□□□□ -1.53
RTG3P38165 KEX1YGL203C 2190 nt5.48□□□□□ -1.53
RTG3P38165 SSH1YBR283C 1473 nt5.48□□□□□ -1.53
RTG3P38165 YGL217CYGL217C 342 nt5.48□□□□□ -1.53
RTG3P38165 YLR120W-AYLR120W-A 102 nt5.48□□□□□ -1.53
RTG3P38165 YNL028WYNL028W 318 nt5.48□□□□□ -1.53
RTG3P38165 SEC39YLR440C 2130 nt5.48□□□□□ -1.53
RTG3P38165 YOL075CYOL075C 3885 nt5.48□□□□□ -1.53
RTG3P38165 UBP12YJL197W 3765 nt5.47□□□□□ -1.53
RTG3P38165 TRM2YKR056W 1920 nt5.47□□□□□ -1.53
RTG3P38165 YDR246W-AYDR246W-A 201 nt5.47□□□□□ -1.53
RTG3P38165 ALG8YOR067C 1734 nt5.47□□□□□ -1.53
RTG3P38165 FAA3YIL009W 2085 nt5.47□□□□□ -1.53
RTG3P38165 FMP32YFL046W 624 nt5.46□□□□□ -1.54
RTG3P38165 TIM13YGR181W 318 nt5.46□□□□□ -1.54
RTG3P38165 RPS0AYGR214W 759 nt5.46□□□□□ -1.54
RTG3P38165 YHR210CYHR210C 1026 nt5.46□□□□□ -1.54
RTG3P38165 HHT1YBR010W 411 nt5.46□□□□□ -1.54
RTG3P38165 snR52snR52 92 nt5.46□□□□□ -1.54
RTG3P38165 PEX5YDR244W 1839 nt5.46□□□□□ -1.54
RTG3P38165 MCX1YBR227C 1563 nt5.46□□□□□ -1.54
RTG3P38165 BRE4YDL231C 3378 nt5.45□□□□□ -1.54
RTG3P38165 OAF1YAL051W 3144 nt5.45□□□□□ -1.54
RTG3P38165 RPG1YBR079C 2895 nt5.45□□□□□ -1.54
RTG3P38165 SRB4YER022W 2064 nt5.45□□□□□ -1.54
RTG3P38165 ECM34YHL043W 513 nt5.45□□□□□ -1.54
RTG3P38165 UBP5YER144C 2418 nt5.45□□□□□ -1.54
RTG3P38165 VPS64YDR200C 1815 nt5.44□□□□□ -1.54
RTG3P38165 SAE3YHR079C-A 276 nt5.44□□□□□ -1.54
RTG3P38165 MNT3YIL014W 1893 nt5.44□□□□□ -1.54
RTG3P38165 CYK3YDL117W 2658 nt5.44□□□□□ -1.54
RTG3P38165 HUL4YJR036C 2679 nt5.44□□□□□ -1.54
RTG3P38165 DAP2YHR028C 2457 nt5.43□□□□□ -1.54
RTG3P38165 EGT2YNL327W 3126 nt5.43□□□□□ -1.54
RTG3P38165 TOF2YKR010C 2316 nt5.43□□□□□ -1.54
RTG3P38165 PAU23YLR037C 375 nt5.43□□□□□ -1.54
RTG3P38165 YOR376WYOR376W 369 nt5.43□□□□□ -1.54
RTG3P38165 CYM1YDR430C 2970 nt5.43□□□□□ -1.54
RTG3P38165 TPS2YDR074W 2691 nt5.42□□□□□ -1.54
RTG3P38165 SPC105YGL093W 2754 nt5.42□□□□□ -1.54
RTG3P38165 KIN4YOR233W 2403 nt5.42□□□□□ -1.54
Retrieved 100 of 7,029 protein–RNA pairs in 15.1 ms