Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.52■□□□□ 0.88
HMGCLP35914 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.52■□□□□ 0.88
HMGCLP35914 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.52■□□□□ 0.88
HMGCLP35914 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.52■□□□□ 0.88
HMGCLP35914 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.52■□□□□ 0.88
HMGCLP35914 AC133552.2-202ENST00000575694 574 ntBASIC20.52■□□□□ 0.88
HMGCLP35914 AC100791.3-201ENST00000617619 330 ntBASIC20.52■□□□□ 0.88
HMGCLP35914 AC008694.1-202ENST00000636953 945 ntBASIC20.52■□□□□ 0.88
HMGCLP35914 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HMGCLP35914 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
HMGCLP35914 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.52■□□□□ 0.88
HMGCLP35914 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
HMGCLP35914 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.52■□□□□ 0.87
HMGCLP35914 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HMGCLP35914 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HMGCLP35914 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.51■□□□□ 0.87
HMGCLP35914 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HMGCLP35914 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMGCLP35914 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMGCLP35914 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HMGCLP35914 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HMGCLP35914 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.51■□□□□ 0.87
HMGCLP35914 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.51■□□□□ 0.87
HMGCLP35914 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMGCLP35914 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMGCLP35914 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
HMGCLP35914 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMGCLP35914 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMGCLP35914 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.51■□□□□ 0.87
HMGCLP35914 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGCLP35914 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
HMGCLP35914 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGCLP35914 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HMGCLP35914 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGCLP35914 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGCLP35914 MIR663A-201ENST00000385250 93 ntBASIC20.5■□□□□ 0.87
HMGCLP35914 AL512625.2-201ENST00000417533 625 ntBASIC20.5■□□□□ 0.87
HMGCLP35914 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGCLP35914 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.5■□□□□ 0.87
HMGCLP35914 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HMGCLP35914 AL050303.2-201ENST00000619798 666 ntBASIC20.5■□□□□ 0.87
HMGCLP35914 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
HMGCLP35914 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGCLP35914 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.5■□□□□ 0.87
HMGCLP35914 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.5■□□□□ 0.87
HMGCLP35914 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.5■□□□□ 0.87
HMGCLP35914 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGCLP35914 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGCLP35914 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.5■□□□□ 0.87
HMGCLP35914 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.5■□□□□ 0.87
HMGCLP35914 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGCLP35914 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGCLP35914 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
HMGCLP35914 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGCLP35914 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.49■□□□□ 0.87
HMGCLP35914 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
HMGCLP35914 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGCLP35914 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGCLP35914 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGCLP35914 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.49■□□□□ 0.87
HMGCLP35914 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HMGCLP35914 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGCLP35914 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGCLP35914 AC007225.1-201ENST00000566331 1836 ntBASIC20.48■□□□□ 0.87
HMGCLP35914 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGCLP35914 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGCLP35914 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGCLP35914 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.48■□□□□ 0.87
HMGCLP35914 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGCLP35914 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.48■□□□□ 0.87
HMGCLP35914 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.48■□□□□ 0.87
HMGCLP35914 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGCLP35914 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGCLP35914 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
HMGCLP35914 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HMGCLP35914 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HMGCLP35914 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HMGCLP35914 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGCLP35914 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGCLP35914 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HMGCLP35914 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
HMGCLP35914 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGCLP35914 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.47■□□□□ 0.87
HMGCLP35914 AC006970.2-201ENST00000450065 779 ntBASIC20.47■□□□□ 0.87
HMGCLP35914 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
HMGCLP35914 MIR2861-201ENST00000636310 90 ntBASIC20.47■□□□□ 0.87
HMGCLP35914 CYP21A1P-202ENST00000354927 1481 ntBASIC20.47■□□□□ 0.87
HMGCLP35914 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
HMGCLP35914 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
HMGCLP35914 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGCLP35914 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.46■□□□□ 0.87
HMGCLP35914 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGCLP35914 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
HMGCLP35914 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.46■□□□□ 0.87
HMGCLP35914 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGCLP35914 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.46■□□□□ 0.87
HMGCLP35914 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGCLP35914 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.46■□□□□ 0.87
HMGCLP35914 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
HMGCLP35914 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms