Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AL359736.2-201ENST00000621992 437 ntBASIC26.36■■□□□ 1.81
SNRPA1P09661 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SNRPA1P09661 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SNRPA1P09661 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
SNRPA1P09661 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
SNRPA1P09661 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SNRPA1P09661 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SNRPA1P09661 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SNRPA1P09661 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC26.36■■□□□ 1.81
SNRPA1P09661 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
SNRPA1P09661 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SNRPA1P09661 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
SNRPA1P09661 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SNRPA1P09661 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
SNRPA1P09661 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SNRPA1P09661 PGM5P4-201ENST00000421970 445 ntBASIC26.35■■□□□ 1.81
SNRPA1P09661 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
SNRPA1P09661 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
SNRPA1P09661 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SNRPA1P09661 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC26.34■■□□□ 1.81
SNRPA1P09661 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
SNRPA1P09661 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
SNRPA1P09661 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC26.34■■□□□ 1.81
SNRPA1P09661 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SNRPA1P09661 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SNRPA1P09661 AC244015.2-201ENST00000616358 1861 ntBASIC26.34■■□□□ 1.81
SNRPA1P09661 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC26.34■■□□□ 1.81
SNRPA1P09661 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC26.34■■□□□ 1.81
SNRPA1P09661 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC26.34■■□□□ 1.81
SNRPA1P09661 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC26.34■■□□□ 1.81
SNRPA1P09661 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SNRPA1P09661 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC26.34■■□□□ 1.81
SNRPA1P09661 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SNRPA1P09661 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SNRPA1P09661 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC26.34■■□□□ 1.81
SNRPA1P09661 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC26.33■■□□□ 1.81
SNRPA1P09661 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC26.33■■□□□ 1.81
SNRPA1P09661 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SNRPA1P09661 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC26.33■■□□□ 1.81
SNRPA1P09661 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SNRPA1P09661 PEX7-202ENST00000367756 680 ntTSL 3 BASIC26.33■■□□□ 1.81
SNRPA1P09661 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC26.33■■□□□ 1.81
SNRPA1P09661 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC26.33■■□□□ 1.81
SNRPA1P09661 AC233263.1-201ENST00000578059 224 ntBASIC26.33■■□□□ 1.81
SNRPA1P09661 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC26.33■■□□□ 1.81
SNRPA1P09661 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SNRPA1P09661 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SNRPA1P09661 AL117328.2-201ENST00000624617 1940 ntBASIC26.32■■□□□ 1.8
SNRPA1P09661 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SNRPA1P09661 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC26.32■■□□□ 1.8
SNRPA1P09661 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC26.32■■□□□ 1.8
SNRPA1P09661 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
SNRPA1P09661 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC26.32■■□□□ 1.8
SNRPA1P09661 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC26.32■■□□□ 1.8
SNRPA1P09661 RN7SL471P-201ENST00000580476 299 ntBASIC26.32■■□□□ 1.8
SNRPA1P09661 KLF2-202ENST00000592003 564 ntTSL 3 BASIC26.32■■□□□ 1.8
SNRPA1P09661 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC26.32■■□□□ 1.8
SNRPA1P09661 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC26.32■■□□□ 1.8
SNRPA1P09661 AL356652.1-201ENST00000615962 565 ntBASIC26.32■■□□□ 1.8
SNRPA1P09661 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SNRPA1P09661 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SNRPA1P09661 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC26.32■■□□□ 1.8
SNRPA1P09661 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC26.32■■□□□ 1.8
SNRPA1P09661 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SNRPA1P09661 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC26.31■■□□□ 1.8
SNRPA1P09661 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SNRPA1P09661 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SNRPA1P09661 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC26.31■■□□□ 1.8
SNRPA1P09661 UBE2SP1-201ENST00000450587 669 ntBASIC26.31■■□□□ 1.8
SNRPA1P09661 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC26.31■■□□□ 1.8
SNRPA1P09661 RPPH1-201ENST00000516869 333 ntBASIC26.31■■□□□ 1.8
SNRPA1P09661 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SNRPA1P09661 BRWD1-AS2-201ENST00000603064 1028 ntBASIC26.31■■□□□ 1.8
SNRPA1P09661 PARN-205ENST00000539279 1557 ntTSL 2 BASIC26.31■■□□□ 1.8
SNRPA1P09661 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SNRPA1P09661 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SNRPA1P09661 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC26.31■■□□□ 1.8
SNRPA1P09661 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC26.31■■□□□ 1.8
SNRPA1P09661 MYB-221ENST00000527615 2381 ntTSL 5 BASIC26.31■■□□□ 1.8
SNRPA1P09661 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
SNRPA1P09661 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
SNRPA1P09661 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC26.3■■□□□ 1.8
SNRPA1P09661 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC26.3■■□□□ 1.8
SNRPA1P09661 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SNRPA1P09661 RPS2P4-201ENST00000476944 856 ntBASIC26.3■■□□□ 1.8
SNRPA1P09661 RHOD-202ENST00000532559 538 ntTSL 3 BASIC26.3■■□□□ 1.8
SNRPA1P09661 RNF121-214ENST00000533380 870 ntTSL 3 BASIC26.3■■□□□ 1.8
SNRPA1P09661 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC26.3■■□□□ 1.8
SNRPA1P09661 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC26.3■■□□□ 1.8
SNRPA1P09661 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC26.3■■□□□ 1.8
SNRPA1P09661 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC26.3■■□□□ 1.8
SNRPA1P09661 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SNRPA1P09661 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC26.3■■□□□ 1.8
SNRPA1P09661 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC26.3■■□□□ 1.8
SNRPA1P09661 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SNRPA1P09661 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SNRPA1P09661 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SNRPA1P09661 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SNRPA1P09661 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SNRPA1P09661 POM121L13P-201ENST00000422362 380 ntBASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms