Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.77■□□□□ 0.92
MMP2P08253 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
MMP2P08253 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MMP2P08253 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.77■□□□□ 0.92
MMP2P08253 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.77■□□□□ 0.92
MMP2P08253 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
MMP2P08253 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
MMP2P08253 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MMP2P08253 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
MMP2P08253 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MMP2P08253 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.77■□□□□ 0.92
MMP2P08253 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
MMP2P08253 AL121603.2-201ENST00000557373 2117 ntBASIC20.77■□□□□ 0.91
MMP2P08253 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
MMP2P08253 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
MMP2P08253 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
MMP2P08253 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MMP2P08253 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.76■□□□□ 0.91
MMP2P08253 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MMP2P08253 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MMP2P08253 FP700111.2-201ENST00000619190 1892 ntBASIC20.76■□□□□ 0.91
MMP2P08253 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
MMP2P08253 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.76■□□□□ 0.91
MMP2P08253 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.76■□□□□ 0.91
MMP2P08253 RARRES2P4-201ENST00000514074 484 ntBASIC20.76■□□□□ 0.91
MMP2P08253 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.76■□□□□ 0.91
MMP2P08253 AL050303.2-201ENST00000619798 666 ntBASIC20.76■□□□□ 0.91
MMP2P08253 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MMP2P08253 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MMP2P08253 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MMP2P08253 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MMP2P08253 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
MMP2P08253 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
MMP2P08253 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
MMP2P08253 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.75■□□□□ 0.91
MMP2P08253 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MMP2P08253 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MMP2P08253 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MMP2P08253 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.75■□□□□ 0.91
MMP2P08253 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
MMP2P08253 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MMP2P08253 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MMP2P08253 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
MMP2P08253 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
MMP2P08253 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.75■□□□□ 0.91
MMP2P08253 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
MMP2P08253 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.75■□□□□ 0.91
MMP2P08253 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
MMP2P08253 AC005181.1-201ENST00000604782 1256 ntBASIC20.75■□□□□ 0.91
MMP2P08253 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.75■□□□□ 0.91
MMP2P08253 MIR2861-201ENST00000636310 90 ntBASIC20.75■□□□□ 0.91
MMP2P08253 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
MMP2P08253 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MMP2P08253 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.75■□□□□ 0.91
MMP2P08253 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MMP2P08253 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.75■□□□□ 0.91
MMP2P08253 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
MMP2P08253 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.75■□□□□ 0.91
MMP2P08253 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
MMP2P08253 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MMP2P08253 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MMP2P08253 CROCCP5-201ENST00000436658 830 ntBASIC20.74■□□□□ 0.91
MMP2P08253 AC026185.1-201ENST00000445748 174 ntBASIC20.74■□□□□ 0.91
MMP2P08253 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.74■□□□□ 0.91
MMP2P08253 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.74■□□□□ 0.91
MMP2P08253 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.74■□□□□ 0.91
MMP2P08253 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MMP2P08253 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MMP2P08253 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
MMP2P08253 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MMP2P08253 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.74■□□□□ 0.91
MMP2P08253 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
MMP2P08253 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
MMP2P08253 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.73■□□□□ 0.91
MMP2P08253 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
MMP2P08253 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.73■□□□□ 0.91
MMP2P08253 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MMP2P08253 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.73■□□□□ 0.91
MMP2P08253 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MMP2P08253 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.73■□□□□ 0.91
MMP2P08253 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.73■□□□□ 0.91
MMP2P08253 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.73■□□□□ 0.91
MMP2P08253 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MMP2P08253 AL157384.1-201ENST00000445995 2473 ntBASIC20.73■□□□□ 0.91
MMP2P08253 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MMP2P08253 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MMP2P08253 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.73■□□□□ 0.91
MMP2P08253 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.73■□□□□ 0.91
MMP2P08253 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.72■□□□□ 0.91
MMP2P08253 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
MMP2P08253 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
MMP2P08253 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
MMP2P08253 FEM1AP1-201ENST00000431297 1995 ntBASIC20.72■□□□□ 0.91
MMP2P08253 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
MMP2P08253 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MMP2P08253 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.72■□□□□ 0.91
MMP2P08253 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
MMP2P08253 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MMP2P08253 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MMP2P08253 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms