Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LGI1O95970 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LGI1O95970 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LGI1O95970 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LGI1O95970 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LGI1O95970 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LGI1O95970 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.98■□□□□ 0.63
LGI1O95970 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
LGI1O95970 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LGI1O95970 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.97■□□□□ 0.63
LGI1O95970 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
LGI1O95970 LINC02228-203ENST00000641970 1355 ntBASIC18.97■□□□□ 0.63
LGI1O95970 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LGI1O95970 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LGI1O95970 AC245052.3-201ENST00000450182 901 ntBASIC18.97■□□□□ 0.63
LGI1O95970 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LGI1O95970 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.97■□□□□ 0.63
LGI1O95970 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.97■□□□□ 0.63
LGI1O95970 AC120498.10-201ENST00000621827 505 ntBASIC18.97■□□□□ 0.63
LGI1O95970 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
LGI1O95970 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LGI1O95970 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LGI1O95970 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.97■□□□□ 0.63
LGI1O95970 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.97■□□□□ 0.63
LGI1O95970 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LGI1O95970 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LGI1O95970 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
LGI1O95970 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.96■□□□□ 0.63
LGI1O95970 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LGI1O95970 AL512408.1-201ENST00000569378 2000 ntBASIC18.96■□□□□ 0.63
LGI1O95970 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LGI1O95970 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LGI1O95970 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LGI1O95970 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LGI1O95970 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.96■□□□□ 0.63
LGI1O95970 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LGI1O95970 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.96■□□□□ 0.63
LGI1O95970 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LGI1O95970 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LGI1O95970 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.96■□□□□ 0.63
LGI1O95970 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LGI1O95970 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.96■□□□□ 0.63
LGI1O95970 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
LGI1O95970 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.96■□□□□ 0.63
LGI1O95970 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.96■□□□□ 0.63
LGI1O95970 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.96■□□□□ 0.63
LGI1O95970 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.96■□□□□ 0.63
LGI1O95970 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LGI1O95970 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LGI1O95970 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.95■□□□□ 0.62
LGI1O95970 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LGI1O95970 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LGI1O95970 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.95■□□□□ 0.62
LGI1O95970 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LGI1O95970 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LGI1O95970 MIR935-201ENST00000401179 91 ntBASIC18.95■□□□□ 0.62
LGI1O95970 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.95■□□□□ 0.62
LGI1O95970 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.95■□□□□ 0.62
LGI1O95970 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LGI1O95970 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LGI1O95970 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LGI1O95970 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.95■□□□□ 0.62
LGI1O95970 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LGI1O95970 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LGI1O95970 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LGI1O95970 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LGI1O95970 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.94■□□□□ 0.62
LGI1O95970 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LGI1O95970 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LGI1O95970 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.94■□□□□ 0.62
LGI1O95970 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.94■□□□□ 0.62
LGI1O95970 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LGI1O95970 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LGI1O95970 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.94■□□□□ 0.62
LGI1O95970 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LGI1O95970 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LGI1O95970 DUX4L2-201ENST00000561772 1275 ntBASIC18.94■□□□□ 0.62
LGI1O95970 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.94■□□□□ 0.62
LGI1O95970 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.94■□□□□ 0.62
LGI1O95970 DUX4L6-201ENST00000626483 1275 ntBASIC18.94■□□□□ 0.62
LGI1O95970 DUX4L1-201ENST00000627662 1275 ntBASIC18.94■□□□□ 0.62
LGI1O95970 DUX4L8-201ENST00000629013 1275 ntBASIC18.94■□□□□ 0.62
LGI1O95970 DUX4L3-201ENST00000630187 1275 ntBASIC18.94■□□□□ 0.62
LGI1O95970 DUX4L7-201ENST00000630678 1275 ntBASIC18.94■□□□□ 0.62
LGI1O95970 DUX4L5-201ENST00000630834 1275 ntBASIC18.94■□□□□ 0.62
LGI1O95970 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LGI1O95970 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LGI1O95970 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LGI1O95970 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LGI1O95970 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LGI1O95970 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.94■□□□□ 0.62
LGI1O95970 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LGI1O95970 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LGI1O95970 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
LGI1O95970 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LGI1O95970 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LGI1O95970 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LGI1O95970 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
LGI1O95970 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LGI1O95970 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms