Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
OPHN1O60890 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
OPHN1O60890 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
OPHN1O60890 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
OPHN1O60890 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
OPHN1O60890 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
OPHN1O60890 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
OPHN1O60890 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.38■■□□□ 1.01
OPHN1O60890 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.38■■□□□ 1.01
OPHN1O60890 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.38■■□□□ 1.01
OPHN1O60890 AC005181.1-201ENST00000604782 1256 ntBASIC21.38■■□□□ 1.01
OPHN1O60890 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.38■■□□□ 1.01
OPHN1O60890 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.38■■□□□ 1.01
OPHN1O60890 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
OPHN1O60890 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
OPHN1O60890 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
OPHN1O60890 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
OPHN1O60890 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.37■■□□□ 1.01
OPHN1O60890 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
OPHN1O60890 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
OPHN1O60890 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
OPHN1O60890 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
OPHN1O60890 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
OPHN1O60890 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.37■■□□□ 1.01
OPHN1O60890 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
OPHN1O60890 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
OPHN1O60890 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
OPHN1O60890 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
OPHN1O60890 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
OPHN1O60890 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
OPHN1O60890 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
OPHN1O60890 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.37■■□□□ 1.01
OPHN1O60890 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.37■■□□□ 1.01
OPHN1O60890 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
OPHN1O60890 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
OPHN1O60890 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.37■■□□□ 1.01
OPHN1O60890 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.37■■□□□ 1.01
OPHN1O60890 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
OPHN1O60890 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
OPHN1O60890 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
OPHN1O60890 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
OPHN1O60890 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
OPHN1O60890 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
OPHN1O60890 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
OPHN1O60890 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
OPHN1O60890 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
OPHN1O60890 FAM201B-201ENST00000458407 597 ntBASIC21.36■■□□□ 1.01
OPHN1O60890 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.36■■□□□ 1.01
OPHN1O60890 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.36■■□□□ 1.01
OPHN1O60890 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.36■■□□□ 1.01
OPHN1O60890 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.36■■□□□ 1.01
OPHN1O60890 KRT87P-202ENST00000534226 1464 ntBASIC21.36■■□□□ 1.01
OPHN1O60890 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
OPHN1O60890 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.36■■□□□ 1.01
OPHN1O60890 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
OPHN1O60890 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
OPHN1O60890 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
OPHN1O60890 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
OPHN1O60890 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
OPHN1O60890 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.35■■□□□ 1.01
OPHN1O60890 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
OPHN1O60890 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
OPHN1O60890 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
OPHN1O60890 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
OPHN1O60890 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.35■■□□□ 1.01
OPHN1O60890 SLC7A5P2-201ENST00000553010 536 ntBASIC21.35■■□□□ 1.01
OPHN1O60890 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.35■■□□□ 1.01
OPHN1O60890 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.35■■□□□ 1.01
OPHN1O60890 AC104187.1-201ENST00000607510 612 ntBASIC21.35■■□□□ 1.01
OPHN1O60890 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.35■■□□□ 1.01
OPHN1O60890 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.35■■□□□ 1.01
OPHN1O60890 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
OPHN1O60890 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
OPHN1O60890 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
OPHN1O60890 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
OPHN1O60890 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
OPHN1O60890 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
OPHN1O60890 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
OPHN1O60890 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
OPHN1O60890 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
OPHN1O60890 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
OPHN1O60890 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
OPHN1O60890 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
OPHN1O60890 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
OPHN1O60890 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.34■■□□□ 1.01
OPHN1O60890 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
OPHN1O60890 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
OPHN1O60890 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
OPHN1O60890 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.34■■□□□ 1.01
OPHN1O60890 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
OPHN1O60890 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
OPHN1O60890 DUX4L16-201ENST00000555130 1264 ntBASIC21.34■■□□□ 1.01
OPHN1O60890 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.34■■□□□ 1.01
OPHN1O60890 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
OPHN1O60890 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.34■■□□□ 1.01
OPHN1O60890 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
OPHN1O60890 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
OPHN1O60890 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
OPHN1O60890 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
OPHN1O60890 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms