Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
FOXN1O15353 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
FOXN1O15353 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
FOXN1O15353 NME3-204ENST00000563498 920 ntTSL 2 BASIC24.66■■□□□ 1.54
FOXN1O15353 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC24.66■■□□□ 1.54
FOXN1O15353 AP001412.1-201ENST00000608405 714 ntBASIC24.66■■□□□ 1.54
FOXN1O15353 AL353708.3-201ENST00000610272 989 ntBASIC24.66■■□□□ 1.54
FOXN1O15353 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
FOXN1O15353 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
FOXN1O15353 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
FOXN1O15353 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
FOXN1O15353 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC24.66■■□□□ 1.54
FOXN1O15353 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
FOXN1O15353 KRT17P1-201ENST00000399211 1546 ntBASIC24.66■■□□□ 1.54
FOXN1O15353 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.65■■□□□ 1.54
FOXN1O15353 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
FOXN1O15353 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
FOXN1O15353 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
FOXN1O15353 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
FOXN1O15353 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC24.65■■□□□ 1.54
FOXN1O15353 HES2-205ENST00000487437 968 ntTSL 3 BASIC24.65■■□□□ 1.54
FOXN1O15353 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
FOXN1O15353 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
FOXN1O15353 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
FOXN1O15353 C11orf96-202ENST00000528572 1834 ntBASIC24.65■■□□□ 1.54
FOXN1O15353 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
FOXN1O15353 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
FOXN1O15353 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC24.64■■□□□ 1.54
FOXN1O15353 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
FOXN1O15353 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
FOXN1O15353 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC24.64■■□□□ 1.54
FOXN1O15353 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
FOXN1O15353 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC24.64■■□□□ 1.54
FOXN1O15353 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC24.64■■□□□ 1.54
FOXN1O15353 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
FOXN1O15353 AC113410.3-201ENST00000623366 203 ntBASIC24.64■■□□□ 1.54
FOXN1O15353 AC137767.1-201ENST00000602918 1920 ntBASIC24.64■■□□□ 1.53
FOXN1O15353 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
FOXN1O15353 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC24.64■■□□□ 1.53
FOXN1O15353 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC24.64■■□□□ 1.53
FOXN1O15353 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
FOXN1O15353 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
FOXN1O15353 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
FOXN1O15353 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
FOXN1O15353 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC24.63■■□□□ 1.53
FOXN1O15353 EEF1DP3-203ENST00000566025 782 ntBASIC24.63■■□□□ 1.53
FOXN1O15353 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
FOXN1O15353 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC24.63■■□□□ 1.53
FOXN1O15353 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
FOXN1O15353 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
FOXN1O15353 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
FOXN1O15353 FXN-202ENST00000396364 980 ntTSL 5 BASIC24.62■■□□□ 1.53
FOXN1O15353 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
FOXN1O15353 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
FOXN1O15353 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC24.62■■□□□ 1.53
FOXN1O15353 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC24.62■■□□□ 1.53
FOXN1O15353 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
FOXN1O15353 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC24.62■■□□□ 1.53
FOXN1O15353 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
FOXN1O15353 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC24.61■■□□□ 1.53
FOXN1O15353 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC24.61■■□□□ 1.53
FOXN1O15353 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
FOXN1O15353 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC24.61■■□□□ 1.53
FOXN1O15353 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC24.61■■□□□ 1.53
FOXN1O15353 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
FOXN1O15353 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
FOXN1O15353 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
FOXN1O15353 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC24.61■■□□□ 1.53
FOXN1O15353 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
FOXN1O15353 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
FOXN1O15353 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
FOXN1O15353 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC24.6■■□□□ 1.53
FOXN1O15353 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
FOXN1O15353 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC24.6■■□□□ 1.53
FOXN1O15353 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
FOXN1O15353 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
FOXN1O15353 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC24.6■■□□□ 1.53
FOXN1O15353 SOX15-203ENST00000570788 1093 ntBASIC24.6■■□□□ 1.53
FOXN1O15353 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC24.6■■□□□ 1.53
FOXN1O15353 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
FOXN1O15353 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
FOXN1O15353 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
FOXN1O15353 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
FOXN1O15353 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
FOXN1O15353 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
FOXN1O15353 AC092368.3-202ENST00000574180 1591 ntBASIC24.59■■□□□ 1.53
FOXN1O15353 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
FOXN1O15353 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC24.59■■□□□ 1.53
FOXN1O15353 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC24.59■■□□□ 1.53
FOXN1O15353 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC24.59■■□□□ 1.53
FOXN1O15353 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
FOXN1O15353 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
FOXN1O15353 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
FOXN1O15353 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
FOXN1O15353 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
FOXN1O15353 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
FOXN1O15353 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
FOXN1O15353 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC24.58■■□□□ 1.53
FOXN1O15353 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC24.58■■□□□ 1.53
FOXN1O15353 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms